Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_
202014-05-27] 32,886 sequences; 488,954,160 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq736 342 8e-92
seq57 307 2e-81
seq22 307 2e-81
seq20 307 2e-81
seq3 307 2e-81
seq2 307 2e-81
seq10 293 4e-77
seq5 262 6e-68
seq15481 205 1e-50
seq4 127 3e-27
seq77 123 4e-26
seq2498 100 5e-19
seq395 78.8 1e-12
>seq736
Length=7293
Score = 342 bits (378), Expect = 8e-92
Identities = 233/258 (90%), Gaps = 3/258 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2969 ACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 2910
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 2909 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 2851
Query 122 ACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
| ||| || | || |||||| ||||||||||||||||||||||||||||| |||||
Sbjct 2850 TACTGCCAAAG-CAATACGGGCTAGTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 2792
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2791 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACGAAATCAAGA 2732
Query 241 AAGAGCTATCAATCTGTC 258
||||||| ||||||||||
Sbjct 2731 AAGAGCTCTCAATCTGTC 2714
Score = 307 bits (340), Expect = 2e-81
Identities = 224/259 (86%), Gaps = 2/259 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2304 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 2245
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | | || | | | ||||||||||||||||||| |||
Sbjct 2244 CCTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCCGGCC 2185
Query 122 ACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
|| | || | | |||| |||||||| | ||||||||||||||| |||||||
Sbjct 2184 GTGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATT 2125
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2124 AACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 2065
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||| ||||||
Sbjct 2064 AAAGAGCTCTCAGTCTGTC 2046
>seq57
Length=90757
Score = 307 bits (340), Expect = 2e-81
Identities = 224/259 (86%), Gaps = 2/259 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 90348 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 90289
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | | || | | | ||||||||||||||||||| |||
Sbjct 90288 CCTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCCGGCC 90229
Query 122 ACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
|| | || | | |||| |||||||| | ||||||||||||||| |||||||
Sbjct 90228 GTGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATT 90169
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 90168 AACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 90109
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||| ||||||
Sbjct 90108 AAAGAGCTCTCAGTCTGTC 90090
>seq22
Length=192287
Score = 307 bits (340), Expect = 2e-81
Identities = 224/259 (86%), Gaps = 2/259 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 17410 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 17351
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | | || | | | ||||||||||||||||||| |||
Sbjct 17350 CCTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCCGGCC 17291
Query 122 ACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
|| | || | | |||| |||||||| | ||||||||||||||| |||||||
Sbjct 17290 GTGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATT 17231
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 17230 AACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 17171
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||| ||||||
Sbjct 17170 AAAGAGCTCTCAGTCTGTC 17152
Score = 307 bits (340), Expect = 2e-81
Identities = 224/259 (86%), Gaps = 2/259 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 80750 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 80691
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | | || | | | ||||||||||||||||||| |||
Sbjct 80690 CCTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCCGGCC 80631
Query 122 ACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
|| | || | | |||| |||||||| | ||||||||||||||| |||||||
Sbjct 80630 GTGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATT 80571
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 80570 AACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 80511
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||| ||||||
Sbjct 80510 AAAGAGCTCTCAGTCTGTC 80492
Score = 307 bits (340), Expect = 2e-81
Identities = 224/259 (86%), Gaps = 2/259 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 151903 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 151844
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | | || | | | ||||||||||||||||||| |||
Sbjct 151843 CCTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCCGGCC 151784
Query 122 ACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
|| | || | | |||| |||||||| | ||||||||||||||| |||||||
Sbjct 151783 GTGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATT 151724
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 151723 AACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 151664
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||| ||||||
Sbjct 151663 AAAGAGCTCTCAGTCTGTC 151645
Score = 288 bits (318), Expect = 2e-75
Identities = 212/246 (86%), Gaps = 2/246 (1%)
Strand=Plus/Minus
Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62
|||| || | | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 118913 CTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 118854
Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122
||||||||||||||||||||| | | || | | | ||||||||||||||||||| |||
Sbjct 118853 CTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCCGGCCG 118794
Query 123 CCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
|| | || | | |||| |||||||| | ||||||||||||||| ||||||||
Sbjct 118793 TGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTA 118734
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 118733 ACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAAA 118674
Query 241 AAGAGC 246
||||||
Sbjct 118673 AAGAGC 118668
>seq20
Length=193719
Score = 307 bits (340), Expect = 2e-81
Identities = 224/259 (86%), Gaps = 2/259 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 66633 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 66574
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | | || | | | ||||||||||||||||||| |||
Sbjct 66573 CCTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCCGGCC 66514
Query 122 ACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
|| | || | | |||| |||||||| | ||||||||||||||| |||||||
Sbjct 66513 GTGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATT 66454
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 66453 AACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 66394
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||| ||||||
Sbjct 66393 AAAGAGCTCTCAGTCTGTC 66375
Score = 307 bits (340), Expect = 2e-81
Identities = 224/259 (86%), Gaps = 2/259 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 98969 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 98910
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | | || | | | ||||||||||||||||||| |||
Sbjct 98909 CCTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCCGGCC 98850
Query 122 ACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
|| | || | | |||| |||||||| | ||||||||||||||| |||||||
Sbjct 98849 GTGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATT 98790
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 98789 AACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 98730
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||| ||||||
Sbjct 98729 AAAGAGCTCTCAGTCTGTC 98711
Score = 307 bits (340), Expect = 2e-81
Identities = 224/259 (86%), Gaps = 2/259 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 103466 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 103407
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | | || | | | ||||||||||||||||||| |||
Sbjct 103406 CCTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCCGGCC 103347
Query 122 ACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
|| | || | | |||| |||||||| | ||||||||||||||| |||||||
Sbjct 103346 GTGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATT 103287
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 103286 AACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 103227
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||| ||||||
Sbjct 103226 AAAGAGCTCTCAGTCTGTC 103208
Score = 179 bits (198), Expect = 6e-43
Identities = 110/117 (94%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
|||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 124743 CTATTTAGTAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 124684
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 124683 ACTAAGAACGGCCATGCACCACCACCCACTGAATCAAGAAAGAGCTCTCAATCTGTC 124627
Score = 89.7 bits (98), Expect = 8e-16
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72
|||||||||| |||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 124982 TCAGTGTAGCACGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 124926
>seq3
Length=64984695
Score = 307 bits (340), Expect = 2e-81
Identities = 224/259 (86%), Gaps = 2/259 (1%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 24562173 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 24562232
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | | || | | | ||||||||||||||||||| |||
Sbjct 24562233 CCTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCCGGCC 24562292
Query 122 ACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
|| | || | | |||| |||||||| | ||||||||||||||| |||||||
Sbjct 24562293 GTGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATT 24562352
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 24562353 AACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 24562412
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||| ||||||
Sbjct 24562413 AAAGAGCTCTCAGTCTGTC 24562431
>seq2
Length=52886895
Score = 307 bits (340), Expect = 2e-81
Identities = 224/259 (86%), Gaps = 2/259 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 45051411 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 45051352
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | | || | | | ||||||||||||||||||| |||
Sbjct 45051351 CCTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCCGGCC 45051292
Query 122 ACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
|| | || | | |||| |||||||| | ||||||||||||||| |||||||
Sbjct 45051291 GTGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATT 45051232
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 45051231 AACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 45051172
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||| ||||||
Sbjct 45051171 AAAGAGCTCTCAGTCTGTC 45051153
Score = 230 bits (254), Expect = 4e-58
Identities = 179/211 (85%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 45059464 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 45059405
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | | || | | | ||||||||||||||||||| |||
Sbjct 45059404 CCTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCCGGCC 45059345
Query 122 ACCAA-CCAT-AGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
|| || || | | |||| |||||||| | ||||||||||||||| |||||||
Sbjct 45059344 GTGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATT 45059285
Query 180 AACCAGACAAATCACTCCACCAACTAAGAAC 210
||||||||||||| |||||||||||||||||
Sbjct 45059284 AACCAGACAAATCGCTCCACCAACTAAGAAC 45059254
>seq10
Length=550871
Score = 293 bits (324), Expect = 4e-77
Identities = 221/259 (85%), Gaps = 2/259 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 76974 ACTCGTTGAATACATCAGTGTAGCGCACGTGCGGCCCAGAACATCTAAGGGCATCACAGA 76915
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | | || | | | ||||| |||||||||||| |||
Sbjct 76914 CCTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCCTTAGTCTCTCTAAGAAGCCGGCC 76855
Query 122 ACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
|| | || | | |||| |||||||| | ||||||||||||||| |||||||
Sbjct 76854 GTGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATT 76795
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 76794 AACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 76735
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||| ||||||
Sbjct 76734 AAAGAGCTCTCAGTCTGTC 76716
Score = 289 bits (320), Expect = 5e-76
Identities = 220/259 (85%), Gaps = 2/259 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | |||||||||||||| ||||||||| |||| ||||||||||||| ||
Sbjct 89003 ACTCGTTGAATACATCAGTGTAGCGCGCATGCGGCCCATAACACCTAAGGGCATCACCGA 88944
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | | || | | | ||||||||||||||||||| |||
Sbjct 88943 CCTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCCGGCC 88884
Query 122 ACCAACCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
|| | || | | |||| |||||||| | ||||||||||||||| |||||||
Sbjct 88883 GTGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATT 88824
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 88823 AACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 88764
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||| ||||||
Sbjct 88763 AAAGAGCTCTCAGTCTGTC 88745
>seq5
Length=46902585
Score = 262 bits (290), Expect = 6e-68
Identities = 207/246 (84%), Gaps = 3/246 (1%)
Strand=Plus/Plus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 32698671 TCAGTGTAGCGAGCAAGCGGCCCAGAACATCTAAGGGCATCACAGACATGTTATTGCCTC 32698730
Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG-CCACCAACCATAG-- 132
|||||| | | | || | | |||||||||||||||||| || | || || |
Sbjct 32698731 AAACTTTCTTGGCCTAAACGACAATAGTCCCTCTAAGAAACCCGGCCGTGAAGGGATGCC 32698790
Query 133 TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATC 192
|| ||| |||| |||||||||| ||||| |||||||| ||||||||||||||||||||
Sbjct 32698791 TCCATGTAGCTAGTTAGCAGGTTGAGGTCCAGTTCGTTAACGGAATTAACCAGACAAATC 32698850
Query 193 ACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAA 252
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 32698851 GCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGATATCTCAG 32698910
Query 253 TCTGTC 258
| ||||
Sbjct 32698911 TTTGTC 32698916
Score = 129 bits (142), Expect = 9e-28
Identities = 173/240 (72%), Gaps = 23/240 (10%)
Strand=Plus/Plus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
|||||||||| ||||||||| |||||||||||| ||| |||| || ||||||||||||
Sbjct 39084604 TCAGTGTAGCAGACGTGCGGCCTAGAACATCTAAGAGCACCACAAACATGTTATTGCCTC 39084663
Query 76 AAACTTCCATTGGCTGGAAGCCA-ATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTC 134
|||||||| |||||| || | || ||||||||||||| | || ||
Sbjct 39084664 AAACTTCC-TTGGCTTAAACATACATCTTCCCTCTAAGAAG-------CTGACTGTA--- 39084712
Query 135 GATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCAC 194
| ||| || || | ||| ||| | |||||||||| ||||||| |
Sbjct 39084713 -AAGGGATGCTTCCACA----------TAGTTACTTAACAGAATTAACCACACAAATCGC 39084761
Query 195 TCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254
||||||||||||||||| ||||| ||||||||||||| | || ||| |||| ||| ||
Sbjct 39084762 TCCACCAACTAAGAACGACCATGTACCACCACCCATAAATAAAAAAAATAGCTGTCAGTC 39084821
>seq15481
Length=410
Score = 205 bits (226), Expect = 1e-50
Identities = 164/194 (85%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 68 ATTGCCTCAAACTTCCATTGGCTGGA-AGCCAATAGTCCCTCTAAGAAGCCAGCCACCAA 126
|||||||||||||||| | | || | ||||| ||||||||||||||| || ||| ||
Sbjct 1 ATTGCCTCAAACTTCCTTGGCCTAAACAGCCA-TAGTCCCTCTAAGAATCCGGCCGTGAA 59
Query 127 CCATAG--TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCA 184
| || ||| | || |||||||| | ||||||||||||||| ||||||||||||
Sbjct 60 GGGATGCCTCCATGTAGTTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCA 119
Query 185 GACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGA 244
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 GACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGA 179
Query 245 GCTATCAATCTGTC 258
||| ||| ||||||
Sbjct 180 GCTCTCAGTCTGTC 193
>seq4
Length=53719093
Score = 127 bits (140), Expect = 3e-27
Identities = 81/87 (93%), Gaps = 1/87 (1%)
Strand=Plus/Plus
Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62
|||| || | | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 47856732 CTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 47856791
Query 63 CTGTTATTGCCTCAAACTTCCATTGGC 89
||||||||||||||||||||| |||||
Sbjct 47856792 CTGTTATTGCCTCAAACTTCC-TTGGC 47856817
>seq77
Length=66831
Score = 123 bits (136), Expect = 4e-26
Identities = 81/88 (92%), Gaps = 1/88 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7509 ACTCGTTGAATACATTAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 7450
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGC 89
|||||||||||||||||||||| |||||
Sbjct 7449 CCTGTTATTGCCTCAAACTTCC-TTGGC 7423
Score = 96.9 bits (106), Expect = 6e-18
Identities = 62/68 (91%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250
|| |||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||
Sbjct 7392 TCGCTCCACCAACTAAGAATGGCCATGCGCCACCACCCATAGAATCAAGAAAGAGCTCTC 7333
Query 251 AATCTGTC 258
| ||| ||
Sbjct 7332 AGTCTATC 7325
>seq2498
Length=1214
Score = 100 bits (110), Expect = 5e-19
Identities = 75/87 (86%), Gaps = 1/87 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | |||||||||| ||| ||||| || ||||||||||||||||||| |
Sbjct 86 ACTCGTTGAATACATCAGTGTAGCACGCATGCGGTTCAAAACATCTAAGGGCATCACAAA 27
Query 62 CCTGTTATTGCCTCAAACTTCCATTGG 88
|||||||||||||||||||||| ||||
Sbjct 26 CCTGTTATTGCCTCAAACTTCC-TTGG 1
>seq395
Length=18076
Score = 78.8 bits (86), Expect = 1e-12
Identities = 43/43 (100%), Gaps = 0/43 (0%)
Strand=Plus/Minus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCAC 58
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 7558 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCAC 7516
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796546152966
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |