Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_
202014-05-27] 32,886 sequences; 488,954,160 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq736 484 1e-134
seq22 408 7e-112
seq20 399 4e-109
seq57 396 5e-108
seq10 376 4e-102
seq77 361 9e-98
seq15685 343 3e-92
seq11979 271 1e-70
seq2 266 6e-69
seq1394 172 9e-41
seq3939 168 1e-39
seq7 150 3e-34
seq5 145 1e-32
seq21761 102 1e-19
>seq736
Length=7293
Score = 484 bits (536), Expect = 1e-134
Identities = 285/295 (97%), Gaps = 1/295 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||||| ||| ||||| | ||||||||||||||||||||||||||||||
Sbjct 6862 TACTAAGCTGAATTACCGTTGCGGCGA-GTTCATCAGTAGGGTAAAACTAACCTGTCTCA 6804
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6803 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 6744
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 6743 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 6684
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6683 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 6624
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6623 CAAACTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 6569
>seq22
Length=192287
Score = 408 bits (452), Expect = 7e-112
Identities = 267/293 (91%), Gaps = 1/293 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | || ||| |||||||||||||||||||||||||||||
Sbjct 130413 TACTAGGTTGAATTACTATTGCGACG-CGGGCATCAGTAGGGTAAAACTAACCTGTCTCA 130355
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 130354 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 130295
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 130294 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 130235
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 130234 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 130175
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| ||| | |||||||||||||||||||| |||||| |||| ||||||
Sbjct 130174 CAAATTCCGAAGATCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 130122
Score = 381 bits (422), Expect = 1e-103
Identities = 262/293 (89%), Gaps = 2/293 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | | ||| |||||||||||| |||| |||||||||||
Sbjct 21512 TACTAGGTTGAATTACTATTGCGATG-CGGGCATCAGTAGGGTTAAACAAACCTGTCTCA 21454
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||| ||||||||| ||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 21453 AGACAGTCTAAACC-AGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 21395
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 21394 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 21335
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 21334 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 21275
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| ||| | |||||||||||||||||||| |||||| |||| ||||||
Sbjct 21274 CAAATTCCGAAGATCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 21222
Score = 352 bits (390), Expect = 5e-95
Identities = 254/295 (86%), Gaps = 15/295 (5%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | | ||| ||||||||||||||||||||||||||||
Sbjct 60106 TACTAGGTTGAATTACTATTGCGATG-CGGGAATCAGTAGGGTAAAACTAACCTGTCTCA 60048
Query 61 TGA--------------CGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106
|| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 60047 CGATGGTTTTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAAT 59988
Query 107 CCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAA 166
||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 59987 CCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAA 59928
Query 167 AGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCT 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 59927 AGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCT 59868
Query 227 GGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCA 281
| |||||||||| ||||||| || || ||||||||||||| |||||| ||||||
Sbjct 59867 GACACCTCTAGCGTCAAATTCTGAAGGTCTAAAGGATCGATCGGCCACGCTTTCA 59813
Score = 325 bits (360), Expect = 7e-87
Identities = 251/296 (85%), Gaps = 4/296 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | || ||| |||||||||||||||||||||||||||||
Sbjct 83628 TACTAGGTTGAATTACTATTGCGACG-CGGGCATCAGTAGGGTAAAACTAACCTGTCTCA 83570
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||||||||| ||||||| |||||||| | ||| ||
Sbjct 83569 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGTACAATCCATCACTTGGTGA 83510
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||| |||||| |||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 83509 ATTATGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATAATAAAGCAACGTCGCTAT 83450
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT---GGTAACTTTTCTGGCACCTCTAG 237
||||||||||||||||||||||| | || | ||| | ||||| |||||||||
Sbjct 83449 AAACGCTTGGCTGCCACAAGCCAGGCCACGCTTTCACGGTTCATATTCTGACACCTCTAG 83390
Query 238 CCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||||||| ||| || |||||||||||||||||||| |||||| |||| |||||
Sbjct 83389 CTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCATATTC 83334
Score = 268 bits (296), Expect = 2e-69
Identities = 177/195 (91%), Gaps = 1/195 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | || ||| |||||||||||||||||||||||||||||
Sbjct 137456 TACTAGGTTGAATTACTATTGCGACG-CGGGCATCAGTAGGGTAAAACTAACCTGTCTCA 137398
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 137397 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 137338
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 137337 ATTCTGCTTCACAATGATAGGAAGAGCCGACATAGAAGGATCAAAAAGCAACGTCGCTAT 137278
Query 181 GAACGCTTGGCTGCC 195
|||||||||||||||
Sbjct 137277 GAACGCTTGGCTGCC 137263
Score = 262 bits (290), Expect = 7e-68
Identities = 163/175 (93%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 137231 GAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 137172
Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 137171 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGC 137112
Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
||||||| ||| | |||||||||||||||||||| |||||| |||| ||||||
Sbjct 137111 TTCAAATTCCGAAGATCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 137057
>seq20
Length=193719
Score = 399 bits (442), Expect = 4e-109
Identities = 265/293 (90%), Gaps = 1/293 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | || ||| |||||||||||||||||||||||||||||
Sbjct 80598 TACTAGGTTGAATTACTATTGCGACG-CGGGCATCAGTAGGGTAAAACTAACCTGTCTCA 80540
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 80539 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 80480
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 80479 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAGAAAGCAACGTCGCTAT 80420
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
|||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 80419 GAACGCTTGGATGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 80360
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| ||| | |||||||||||||||||||| |||||| |||| ||||||
Sbjct 80359 CAAATTCCGAAGATCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 80307
Score = 297 bits (328), Expect = 3e-78
Identities = 184/196 (94%), Gaps = 1/196 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | ||| | ||| |||| ||||||||||||||||||||||||||||||
Sbjct 131521 TACTGAGCAGGATTTCTTTTGCAACGACAAGTCATCAGTAGGGTAAAACTAACCTGTCTC 131462
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 131461 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 131402
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 131401 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 131342
Query 180 TGAACGCTTGGCTGCC 195
||||||||||||||||
Sbjct 131341 TGAACGCTTGGCTGCC 131326
Score = 208 bits (230), Expect = 1e-51
Identities = 153/177 (86%), Gaps = 1/177 (1%)
Strand=Plus/Minus
Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177
|||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct 131323 CGAACTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGC 131264
Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237
|||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 131263 TATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG 131204
Query 238 CCTCAAA-TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||| | || | | |||||||||||||||| | ||||| ||| ||||||
Sbjct 131203 ATTGAAACTCTCAATAATCAAAAGGATCGATAGGCCCCGCTTTCGCGGTCCGTATTC 131147
>seq57
Length=90757
Score = 396 bits (438), Expect = 5e-108
Identities = 259/284 (91%), Gaps = 1/284 (0%)
Strand=Plus/Minus
Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
||||||| |||| | | ||| ||||||||||||||||||||||||||||| || |||||
Sbjct 57507 GAATTACTATTGCGATG-CGGGCATCAGTAGGGTAAAACTAACCTGTCTCACGATGGTCT 57449
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129
||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||
Sbjct 57448 AAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTT 57389
Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 57388 CACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 57329
Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||
Sbjct 57328 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCG 57269
Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| || |||||||||||||||||||| |||||| ||| ||||||
Sbjct 57268 AAGGTCTAAAGGATCGATAGGCCACGCTTTCACTGTTCGTATTC 57225
Score = 147 bits (162), Expect = 4e-33
Identities = 94/101 (93%), Gaps = 1/101 (1%)
Strand=Plus/Minus
Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
||||||| |||| | || ||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 58625 GAATTACTATTGCGACG-CGGGCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 58567
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAA 110
||||||||||||||||||||||| |||||||||||||||||
Sbjct 58566 AAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAA 58526
>seq10
Length=550871
Score = 376 bits (416), Expect = 4e-102
Identities = 260/293 (89%), Gaps = 1/293 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | || ||| |||||||||||||||||||||||||||||
Sbjct 83779 TACTAGGTTGAATTACTATTGCGACG-CGGGCATCAGTAGGGTAAAACTAACCTGTCTCA 83721
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 83720 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 83661
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 83660 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCACTAT 83601
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||| ||||||||||| |||||||||||||||||||||||||| || ||||||||| |
Sbjct 83600 GAACGTTTGGCTGCCACTAGCCAGTTATCCCTGTGGTAACTTTTTTGACACCTCTAGATT 83541
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| | | || ||||||| |||||||||||| |||||| |||| |||||
Sbjct 83540 CAAATTCCAAAGGTCTAAAGGTTCGATAGGCCACGCTTTCACGGTTCATATTC 83488
Score = 178 bits (196), Expect = 2e-42
Identities = 126/143 (88%), Gaps = 1/143 (1%)
Strand=Plus/Minus
Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
||||||| |||| | || ||| |||| |||||||||||||||||||||||| ||| ||||
Sbjct 17722 GAATTACTATTGCGACG-CGGGCATCTGTAGGGTAAAACTAACCTGTCTCACGACAGTCT 17664
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129
||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||
Sbjct 17663 AAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTT 17604
Query 130 CGGTATGATAGGAAGAGCCGACA 152
| |||||||||||||| ||||
Sbjct 17603 CACAATGATAGGAAGAGCTGACA 17581
Score = 89.7 bits (98), Expect = 9e-16
Identities = 61/69 (88%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 225 CTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGG 284
||| |||||||||| ||||||| ||| || |||||||||||||||||||| |||||| ||
Sbjct 17586 CTGACACCTCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGG 17527
Query 285 TTTGTATTC 293
|| ||||||
Sbjct 17526 TTCGTATTC 17518
>seq77
Length=66831
Score = 361 bits (400), Expect = 9e-98
Identities = 252/285 (88%), Gaps = 1/285 (0%)
Strand=Plus/Minus
Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
||||||| |||| | || || ||||| || |||||||||||||||||| | |||||| |
Sbjct 15443 GAATTACTATTGCGA-GATGGGCATCAATATGGTAAAACTAACCTGTCTTACGACGGTTT 15385
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129
|||||||||||| |||||| ||| |||||||||||||||||| ||| |||||||| |
Sbjct 15384 AAACCCAGCTCATGTTCCCAATTGGTGGGTGAACAATCCAACACTTGTTGAATTCTGTCT 15325
Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189
| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 15324 CACAGTGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCACTATGAACGCTTG 15265
Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||
Sbjct 15264 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCG 15205
Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294
| || |||||||||||||||||||| ||||||||||| |||| ||
Sbjct 15204 AAGGTCTAAAGGATCGATAGGCCACGCTTTCATGGTTCGTATACA 15160
Score = 260 bits (288), Expect = 2e-67
Identities = 190/219 (87%), Gaps = 1/219 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | |||| ||||| || |||||||||||||||||| |
Sbjct 19894 TACTAGGTTGAATTACTATTGCGAT-ACGGGCATCAATATGGTAAAACTAACCTGTCTTA 19836
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||| |||||||||||||||||||||||| ||||||||||||||||| || ||
Sbjct 19835 CGACGGTTTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAAAACTGTGTGA 19776
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||| || || |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 19775 ATTTTGTCTCACAATGATAGGAAGAGCTGACATCGAAGGATCAAAAAGCAACGTCGCTAT 19716
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAA 219
|||||||||||||||||||||||||||||| ||||||||
Sbjct 19715 GAACGCTTGGCTGCCACAAGCCAGTTATCCATGTGGTAA 19677
>seq15685
Length=407
Score = 343 bits (380), Expect = 3e-92
Identities = 225/248 (91%), Gaps = 0/248 (0%)
Strand=Plus/Minus
Query 39 AGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGG 98
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct 250 AGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGG 191
Query 99 TGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAG 158
||||||||||||| ||| |||||||||||| ||||||||||||| |||||||||||
Sbjct 190 TGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGACGACATCGAAG 131
Query 159 GATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 218
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 130 GATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTTTCTCTGTGGTA 71
Query 219 ACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTT 278
||||||||| ||||||||| | |||| ||| | |||||||||||||||||||| |||
Sbjct 70 ACTTTTCTGACACCTCTAGTTTGAAATCCCGAAGATCTAAAGGATCGATAGGCCACGCTT 11
Query 279 TCATGGTT 286
||| ||||
Sbjct 10 TCACGGTT 3
>seq11979
Length=482
Score = 271 bits (300), Expect = 1e-70
Identities = 233/286 (81%), Gaps = 19/286 (7%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | | ||| |||| ||||||||||||||||||||||||
Sbjct 199 TACTAGGTTGAATTACTATTGCGATG-CGGGCATCGGTAGGGTAAAACTAACCTGTCTCA 257
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 258 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 317
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 318 ATTCTGCTTCACAATGATAAGAAGAGCCGACATCGAAGGATCAAAAAGAAACGTCGCTAT 377
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTG--------TGGTAA---CT------TT 223
||||||||||||| |||||||| | ||| | ||||| || |
Sbjct 378 GAACGCTTGGCTGTCACAAGCC-GACATCGAAGGAACAAAAGGGTAAAAGCTCGTTTGAT 436
Query 224 TCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG 269
|||| |||||||||| ||||||| ||| | |||||||||||||||
Sbjct 437 TCTGACACCTCTAGCTTCAAATTCCGAAGATCTAAAGGATCGATAG 482
>seq2
Length=52886895
Score = 266 bits (294), Expect = 6e-69
Identities = 201/237 (85%), Gaps = 11/237 (5%)
Strand=Plus/Plus
Query 57 CTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTA 116
||||||||||||||||||| ||||||||||||| |||||||| ||| |||
Sbjct 4505228 CTCATGACGGTCTAAACCC-GCTCACGTTCCCT----------GAACAATCTAACACTTG 4505276
Query 117 CCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCG 176
|||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||
Sbjct 4505277 GTGAATTCTGCTTCACAATGATATGAAGAGCCGGCATCGAAGGATCAAAAAGCAACGTCG 4505336
Query 177 CTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTA 236
||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct 4505337 CTACGAACGCTTGGCTGCCACAAGCCAGTTATTTATGTGGTAACTTTTCTGACACCTCTA 4505396
Query 237 GCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||||||| ||| | |||||||||||||||||||| ||||| |||| ||||||
Sbjct 4505397 TCTTCAAATTCCGAAAGTCTAAAGGATCGATAGGCCACGTTTTCACGGTTCGTATTC 4505453
Score = 223 bits (246), Expect = 6e-56
Identities = 157/178 (88%), Gaps = 1/178 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| ||| | | ||| |||||||||||||||||||||||||||||
Sbjct 45063316 TACTAGGTTGAATTACTATTATGATG-CGGGCATCAGTAGGGTAAAACTAACCTGTCTCA 45063258
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||| |||||||||| |||||||||||||||||| ||| ||
Sbjct 45063257 TGACGGTCTAAACCCAGCTCATGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 45063198
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178
|||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct 45063197 ATTCTGCTTCACATTGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTTGCT 45063140
Score = 84.2 bits (92), Expect = 4e-14
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 223 TTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCAT 282
||||| |||||||||| ||||||| | | || ||||||||||||||||||| ||||||
Sbjct 45063140 TTCTGACACCTCTAGCTTCAAATTCCAAAGGTCTAAAGGATCGATAGGCCATGCTTTCAC 45063081
Query 283 GGTTTGTATTC 293
|||| ||||||
Sbjct 45063080 GGTTCGTATTC 45063070
>seq1394
Length=2068
Score = 172 bits (190), Expect = 9e-41
Identities = 120/135 (89%), Gaps = 1/135 (1%)
Strand=Plus/Minus
Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
||||||| ||| | || ||||||||||||||||||||||||| ||||||| ||||||||
Sbjct 1391 GAATTACTATTACGACG-CGGTCATCAGTAGGGTAAAACTAACATGTCTCACGACGGTCT 1333
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129
||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||
Sbjct 1332 AAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTT 1273
Query 130 CGGTATGATAGGAAG 144
| |||||||||||
Sbjct 1272 CACAATGATAGGAAG 1258
>seq3939
Length=913
Score = 168 bits (186), Expect = 1e-39
Identities = 96/98 (98%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 198 AAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTA 257
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 425 AAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACTCCGAGGGACTA 366
Query 258 AAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||||||||||||||
Sbjct 365 AAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 328
Score = 84.2 bits (92), Expect = 4e-14
Identities = 46/46 (100%), Gaps = 0/46 (0%)
Strand=Plus/Minus
Query 161 TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 913 TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 868
>seq7
Length=48366697
Score = 150 bits (166), Expect = 3e-34
Identities = 118/140 (84%), Gaps = 1/140 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | |||||| |||| | || ||| ||||| |||||||||||| || ||| |||
Sbjct 43905328 TACTAGGTTGAATTAATATTGTGACG-CGGGCATCAATAGGGTAAAACTTACTTGTTTCA 43905270
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 43905269 GGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 43905210
Query 121 ATTCTGCTTCGGTATGATAG 140
|||||||||| |||||||
Sbjct 43905209 ATTCTGCTTCACAATGATAG 43905190
>seq5
Length=46902585
Score = 145 bits (160), Expect = 1e-32
Identities = 94/103 (91%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 97 GGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGA 156
||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| |
Sbjct 38856849 GGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCAA 38856790
Query 157 AGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAA 199
|| ||||||||||||||||||||||||||||||||||||||||
Sbjct 38856789 AGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAA 38856747
>seq21761
Length=303
Score = 102 bits (112), Expect = 1e-19
Identities = 68/76 (89%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||| |||||||| ||| |||||| ||||||||||||||||||||||||||||||
Sbjct 228 TACTAAATTGAATTACCGTTGCGGCGACCTTCATCAGTAGGGTAAAACTAACCTGTCTCA 287
Query 61 TGACGGTCTAAACCCA 76
|||||||||||||||
Sbjct 288 CGACGGTCTAAACCCA 303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854119022016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |