Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq736 484 1e-134 seq22 408 7e-112 seq20 399 4e-109 seq57 396 5e-108 seq10 376 4e-102 seq77 361 9e-98 seq15685 343 3e-92 seq11979 271 1e-70 seq2 266 6e-69 seq1394 172 9e-41 seq3939 168 1e-39 seq7 150 3e-34 seq5 145 1e-32 seq21761 102 1e-19 >seq736 Length=7293 Score = 484 bits (536), Expect = 1e-134 Identities = 285/295 (97%), Gaps = 1/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||| ||| ||||| | |||||||||||||||||||||||||||||| Sbjct 6862 TACTAAGCTGAATTACCGTTGCGGCGA-GTTCATCAGTAGGGTAAAACTAACCTGTCTCA 6804 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6803 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 6744 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 6743 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 6684 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6683 GAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 6624 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6623 CAAACTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 6569 >seq22 Length=192287 Score = 408 bits (452), Expect = 7e-112 Identities = 267/293 (91%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | || ||| ||||||||||||||||||||||||||||| Sbjct 130413 TACTAGGTTGAATTACTATTGCGACG-CGGGCATCAGTAGGGTAAAACTAACCTGTCTCA 130355 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 130354 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 130295 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 130294 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 130235 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 130234 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 130175 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| | |||||||||||||||||||| |||||| |||| |||||| Sbjct 130174 CAAATTCCGAAGATCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 130122 Score = 381 bits (422), Expect = 1e-103 Identities = 262/293 (89%), Gaps = 2/293 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | ||| |||||||||||| |||| ||||||||||| Sbjct 21512 TACTAGGTTGAATTACTATTGCGATG-CGGGCATCAGTAGGGTTAAACAAACCTGTCTCA 21454 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||| ||||||||| ||||||||||||||||| |||||||||||||||||| ||| || Sbjct 21453 AGACAGTCTAAACC-AGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 21395 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 21394 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 21335 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 21334 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 21275 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| | |||||||||||||||||||| |||||| |||| |||||| Sbjct 21274 CAAATTCCGAAGATCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 21222 Score = 352 bits (390), Expect = 5e-95 Identities = 254/295 (86%), Gaps = 15/295 (5%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | ||| |||||||||||||||||||||||||||| Sbjct 60106 TACTAGGTTGAATTACTATTGCGATG-CGGGAATCAGTAGGGTAAAACTAACCTGTCTCA 60048 Query 61 TGA--------------CGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106 || ||||||||||||||||||||||||||||| ||||||||||||| Sbjct 60047 CGATGGTTTTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAAT 59988 Query 107 CCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAA 166 ||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 59987 CCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAA 59928 Query 167 AGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCT 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 59927 AGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCT 59868 Query 227 GGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCA 281 | |||||||||| ||||||| || || ||||||||||||| |||||| |||||| Sbjct 59867 GACACCTCTAGCGTCAAATTCTGAAGGTCTAAAGGATCGATCGGCCACGCTTTCA 59813 Score = 325 bits (360), Expect = 7e-87 Identities = 251/296 (85%), Gaps = 4/296 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | || ||| ||||||||||||||||||||||||||||| Sbjct 83628 TACTAGGTTGAATTACTATTGCGACG-CGGGCATCAGTAGGGTAAAACTAACCTGTCTCA 83570 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| ||||||| |||||||| | ||| || Sbjct 83569 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGTACAATCCATCACTTGGTGA 83510 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||| |||||| |||||||||||||||||||||||||||| | |||||||||||||||| Sbjct 83509 ATTATGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATAATAAAGCAACGTCGCTAT 83450 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT---GGTAACTTTTCTGGCACCTCTAG 237 ||||||||||||||||||||||| | || | ||| | ||||| ||||||||| Sbjct 83449 AAACGCTTGGCTGCCACAAGCCAGGCCACGCTTTCACGGTTCATATTCTGACACCTCTAG 83390 Query 238 CCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||||||| ||| || |||||||||||||||||||| |||||| |||| ||||| Sbjct 83389 CTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCATATTC 83334 Score = 268 bits (296), Expect = 2e-69 Identities = 177/195 (91%), Gaps = 1/195 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | || ||| ||||||||||||||||||||||||||||| Sbjct 137456 TACTAGGTTGAATTACTATTGCGACG-CGGGCATCAGTAGGGTAAAACTAACCTGTCTCA 137398 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 137397 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 137338 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 137337 ATTCTGCTTCACAATGATAGGAAGAGCCGACATAGAAGGATCAAAAAGCAACGTCGCTAT 137278 Query 181 GAACGCTTGGCTGCC 195 ||||||||||||||| Sbjct 137277 GAACGCTTGGCTGCC 137263 Score = 262 bits (290), Expect = 7e-68 Identities = 163/175 (93%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 137231 GAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 137172 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 137171 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGC 137112 Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 ||||||| ||| | |||||||||||||||||||| |||||| |||| |||||| Sbjct 137111 TTCAAATTCCGAAGATCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 137057 >seq20 Length=193719 Score = 399 bits (442), Expect = 4e-109 Identities = 265/293 (90%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | || ||| ||||||||||||||||||||||||||||| Sbjct 80598 TACTAGGTTGAATTACTATTGCGACG-CGGGCATCAGTAGGGTAAAACTAACCTGTCTCA 80540 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 80539 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 80480 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 80479 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAGAAAGCAACGTCGCTAT 80420 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 80419 GAACGCTTGGATGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 80360 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| | |||||||||||||||||||| |||||| |||| |||||| Sbjct 80359 CAAATTCCGAAGATCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 80307 Score = 297 bits (328), Expect = 3e-78 Identities = 184/196 (94%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||| | ||| |||| |||||||||||||||||||||||||||||| Sbjct 131521 TACTGAGCAGGATTTCTTTTGCAACGACAAGTCATCAGTAGGGTAAAACTAACCTGTCTC 131462 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 131461 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 131402 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 131401 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 131342 Query 180 TGAACGCTTGGCTGCC 195 |||||||||||||||| Sbjct 131341 TGAACGCTTGGCTGCC 131326 Score = 208 bits (230), Expect = 1e-51 Identities = 153/177 (86%), Gaps = 1/177 (1%) Strand=Plus/Minus Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 |||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 131323 CGAACTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGC 131264 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 131263 TATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG 131204 Query 238 CCTCAAA-TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | || | | |||||||||||||||| | ||||| ||| |||||| Sbjct 131203 ATTGAAACTCTCAATAATCAAAAGGATCGATAGGCCCCGCTTTCGCGGTCCGTATTC 131147 >seq57 Length=90757 Score = 396 bits (438), Expect = 5e-108 Identities = 259/284 (91%), Gaps = 1/284 (0%) Strand=Plus/Minus Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 ||||||| |||| | | ||| ||||||||||||||||||||||||||||| || ||||| Sbjct 57507 GAATTACTATTGCGATG-CGGGCATCAGTAGGGTAAAACTAACCTGTCTCACGATGGTCT 57449 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 ||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||| Sbjct 57448 AAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTT 57389 Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 57388 CACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 57329 Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| || Sbjct 57328 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCG 57269 Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | || |||||||||||||||||||| |||||| ||| |||||| Sbjct 57268 AAGGTCTAAAGGATCGATAGGCCACGCTTTCACTGTTCGTATTC 57225 Score = 147 bits (162), Expect = 4e-33 Identities = 94/101 (93%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 ||||||| |||| | || ||| ||||||||||||||||||||||||||||| |||||||| Sbjct 58625 GAATTACTATTGCGACG-CGGGCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 58567 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAA 110 ||||||||||||||||||||||| ||||||||||||||||| Sbjct 58566 AAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAA 58526 >seq10 Length=550871 Score = 376 bits (416), Expect = 4e-102 Identities = 260/293 (89%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | || ||| ||||||||||||||||||||||||||||| Sbjct 83779 TACTAGGTTGAATTACTATTGCGACG-CGGGCATCAGTAGGGTAAAACTAACCTGTCTCA 83721 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 83720 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 83661 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 83660 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCACTAT 83601 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||| ||||||||||| |||||||||||||||||||||||||| || ||||||||| | Sbjct 83600 GAACGTTTGGCTGCCACTAGCCAGTTATCCCTGTGGTAACTTTTTTGACACCTCTAGATT 83541 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| | | || ||||||| |||||||||||| |||||| |||| ||||| Sbjct 83540 CAAATTCCAAAGGTCTAAAGGTTCGATAGGCCACGCTTTCACGGTTCATATTC 83488 Score = 178 bits (196), Expect = 2e-42 Identities = 126/143 (88%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 ||||||| |||| | || ||| |||| |||||||||||||||||||||||| ||| |||| Sbjct 17722 GAATTACTATTGCGACG-CGGGCATCTGTAGGGTAAAACTAACCTGTCTCACGACAGTCT 17664 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 ||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||| Sbjct 17663 AAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTT 17604 Query 130 CGGTATGATAGGAAGAGCCGACA 152 | |||||||||||||| |||| Sbjct 17603 CACAATGATAGGAAGAGCTGACA 17581 Score = 89.7 bits (98), Expect = 9e-16 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 225 CTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGG 284 ||| |||||||||| ||||||| ||| || |||||||||||||||||||| |||||| || Sbjct 17586 CTGACACCTCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGG 17527 Query 285 TTTGTATTC 293 || |||||| Sbjct 17526 TTCGTATTC 17518 >seq77 Length=66831 Score = 361 bits (400), Expect = 9e-98 Identities = 252/285 (88%), Gaps = 1/285 (0%) Strand=Plus/Minus Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 ||||||| |||| | || || ||||| || |||||||||||||||||| | |||||| | Sbjct 15443 GAATTACTATTGCGA-GATGGGCATCAATATGGTAAAACTAACCTGTCTTACGACGGTTT 15385 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 |||||||||||| |||||| ||| |||||||||||||||||| ||| |||||||| | Sbjct 15384 AAACCCAGCTCATGTTCCCAATTGGTGGGTGAACAATCCAACACTTGTTGAATTCTGTCT 15325 Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189 | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 15324 CACAGTGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCACTATGAACGCTTG 15265 Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| || Sbjct 15264 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCG 15205 Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | || |||||||||||||||||||| ||||||||||| |||| || Sbjct 15204 AAGGTCTAAAGGATCGATAGGCCACGCTTTCATGGTTCGTATACA 15160 Score = 260 bits (288), Expect = 2e-67 Identities = 190/219 (87%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | |||| ||||| || |||||||||||||||||| | Sbjct 19894 TACTAGGTTGAATTACTATTGCGAT-ACGGGCATCAATATGGTAAAACTAACCTGTCTTA 19836 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||||| |||||||||||||||||||||||| ||||||||||||||||| || || Sbjct 19835 CGACGGTTTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAAAACTGTGTGA 19776 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||| || || |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 19775 ATTTTGTCTCACAATGATAGGAAGAGCTGACATCGAAGGATCAAAAAGCAACGTCGCTAT 19716 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAA 219 |||||||||||||||||||||||||||||| |||||||| Sbjct 19715 GAACGCTTGGCTGCCACAAGCCAGTTATCCATGTGGTAA 19677 >seq15685 Length=407 Score = 343 bits (380), Expect = 3e-92 Identities = 225/248 (91%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 39 AGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGG 98 |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct 250 AGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGG 191 Query 99 TGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAG 158 ||||||||||||| ||| |||||||||||| ||||||||||||| ||||||||||| Sbjct 190 TGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGACGACATCGAAG 131 Query 159 GATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 218 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 130 GATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTTTCTCTGTGGTA 71 Query 219 ACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTT 278 ||||||||| ||||||||| | |||| ||| | |||||||||||||||||||| ||| Sbjct 70 ACTTTTCTGACACCTCTAGTTTGAAATCCCGAAGATCTAAAGGATCGATAGGCCACGCTT 11 Query 279 TCATGGTT 286 ||| |||| Sbjct 10 TCACGGTT 3 >seq11979 Length=482 Score = 271 bits (300), Expect = 1e-70 Identities = 233/286 (81%), Gaps = 19/286 (7%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | ||| |||| |||||||||||||||||||||||| Sbjct 199 TACTAGGTTGAATTACTATTGCGATG-CGGGCATCGGTAGGGTAAAACTAACCTGTCTCA 257 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 258 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 317 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| Sbjct 318 ATTCTGCTTCACAATGATAAGAAGAGCCGACATCGAAGGATCAAAAAGAAACGTCGCTAT 377 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTG--------TGGTAA---CT------TT 223 ||||||||||||| |||||||| | ||| | ||||| || | Sbjct 378 GAACGCTTGGCTGTCACAAGCC-GACATCGAAGGAACAAAAGGGTAAAAGCTCGTTTGAT 436 Query 224 TCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG 269 |||| |||||||||| ||||||| ||| | ||||||||||||||| Sbjct 437 TCTGACACCTCTAGCTTCAAATTCCGAAGATCTAAAGGATCGATAG 482 >seq2 Length=52886895 Score = 266 bits (294), Expect = 6e-69 Identities = 201/237 (85%), Gaps = 11/237 (5%) Strand=Plus/Plus Query 57 CTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTA 116 ||||||||||||||||||| ||||||||||||| |||||||| ||| ||| Sbjct 4505228 CTCATGACGGTCTAAACCC-GCTCACGTTCCCT----------GAACAATCTAACACTTG 4505276 Query 117 CCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCG 176 |||||||||||| |||||| ||||||||| |||||||||||||||||||||||||| Sbjct 4505277 GTGAATTCTGCTTCACAATGATATGAAGAGCCGGCATCGAAGGATCAAAAAGCAACGTCG 4505336 Query 177 CTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTA 236 ||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct 4505337 CTACGAACGCTTGGCTGCCACAAGCCAGTTATTTATGTGGTAACTTTTCTGACACCTCTA 4505396 Query 237 GCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||||||| ||| | |||||||||||||||||||| ||||| |||| |||||| Sbjct 4505397 TCTTCAAATTCCGAAAGTCTAAAGGATCGATAGGCCACGTTTTCACGGTTCGTATTC 4505453 Score = 223 bits (246), Expect = 6e-56 Identities = 157/178 (88%), Gaps = 1/178 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| ||| | | ||| ||||||||||||||||||||||||||||| Sbjct 45063316 TACTAGGTTGAATTACTATTATGATG-CGGGCATCAGTAGGGTAAAACTAACCTGTCTCA 45063258 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||| |||||||||| |||||||||||||||||| ||| || Sbjct 45063257 TGACGGTCTAAACCCAGCTCATGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 45063198 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 |||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct 45063197 ATTCTGCTTCACATTGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTTGCT 45063140 Score = 84.2 bits (92), Expect = 4e-14 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 223 TTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCAT 282 ||||| |||||||||| ||||||| | | || ||||||||||||||||||| |||||| Sbjct 45063140 TTCTGACACCTCTAGCTTCAAATTCCAAAGGTCTAAAGGATCGATAGGCCATGCTTTCAC 45063081 Query 283 GGTTTGTATTC 293 |||| |||||| Sbjct 45063080 GGTTCGTATTC 45063070 >seq1394 Length=2068 Score = 172 bits (190), Expect = 9e-41 Identities = 120/135 (89%), Gaps = 1/135 (1%) Strand=Plus/Minus Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 ||||||| ||| | || ||||||||||||||||||||||||| ||||||| |||||||| Sbjct 1391 GAATTACTATTACGACG-CGGTCATCAGTAGGGTAAAACTAACATGTCTCACGACGGTCT 1333 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 ||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||| Sbjct 1332 AAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTT 1273 Query 130 CGGTATGATAGGAAG 144 | ||||||||||| Sbjct 1272 CACAATGATAGGAAG 1258 >seq3939 Length=913 Score = 168 bits (186), Expect = 1e-39 Identities = 96/98 (98%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 198 AAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTA 257 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 425 AAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACTCCGAGGGACTA 366 Query 258 AAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||||||||||||||| Sbjct 365 AAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 328 Score = 84.2 bits (92), Expect = 4e-14 Identities = 46/46 (100%), Gaps = 0/46 (0%) Strand=Plus/Minus Query 161 TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 913 TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 868 >seq7 Length=48366697 Score = 150 bits (166), Expect = 3e-34 Identities = 118/140 (84%), Gaps = 1/140 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | |||||| |||| | || ||| ||||| |||||||||||| || ||| ||| Sbjct 43905328 TACTAGGTTGAATTAATATTGTGACG-CGGGCATCAATAGGGTAAAACTTACTTGTTTCA 43905270 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 43905269 GGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 43905210 Query 121 ATTCTGCTTCGGTATGATAG 140 |||||||||| ||||||| Sbjct 43905209 ATTCTGCTTCACAATGATAG 43905190 >seq5 Length=46902585 Score = 145 bits (160), Expect = 1e-32 Identities = 94/103 (91%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 97 GGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGA 156 ||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| | Sbjct 38856849 GGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCAA 38856790 Query 157 AGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAA 199 || |||||||||||||||||||||||||||||||||||||||| Sbjct 38856789 AGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAA 38856747 >seq21761 Length=303 Score = 102 bits (112), Expect = 1e-19 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||| |||||||| ||| |||||| |||||||||||||||||||||||||||||| Sbjct 228 TACTAAATTGAATTACCGTTGCGGCGACCTTCATCAGTAGGGTAAAACTAACCTGTCTCA 287 Query 61 TGACGGTCTAAACCCA 76 ||||||||||||||| Sbjct 288 CGACGGTCTAAACCCA 303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854119022016