Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_ 202014-05-27] 32,886 sequences; 488,954,160 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq736 762 0.0 seq22 693 0.0 seq10 569 7e-160 seq77 562 1e-157 seq20 499 1e-138 seq57 470 5e-130 seq3939 430 4e-118 seq2 122 3e-25 seq32886 78.8 3e-12 seq8 78.8 3e-12 seq3 78.8 3e-12 seq7154 75.2 4e-11 >seq736 Length=7293 Score = 762 bits (844), Expect = 0.0 Identities = 491/535 (92%), Gaps = 4/535 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 6537 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 6478 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 6477 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCAACCCGGGTC 6418 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||||||||| |||||| ||| || |||| |||| |||||||| ||| Sbjct 6417 GGCCCGCGAAGGACCTTAAGACCAGAAGTTGGACGATGAAT-CCAGCCCCGCTTCACTGA 6359 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||||||| ||| | |||| |||||||||| |||||||| |||||| | || Sbjct 6358 GTAAGTAAAAAAACAATAGGAGTAGAGGTATTTCACCGGCGCCGAA---GCTCCCTCCTA 6302 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||||| | ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 6301 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 6242 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 |||||||||||||| || |||||||||||||| |||||||||||||||||||| ||||| Sbjct 6241 TTTCCCCGCTGATTTTGCGAAGCCCGTTCCCTTCGCTGTGGTTTCGCTAGATAGGAGATA 6182 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6181 GGGACAGGGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 6122 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 6121 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACT 6062 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTC 541 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct 6061 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCGCTTTC 6007 >seq22 Length=192287 Score = 693 bits (768), Expect = 0.0 Identities = 478/533 (90%), Gaps = 8/533 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | |||||||||||||| |||| Sbjct 21188 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCATTATC 21129 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 21128 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATC 21069 Query 127 GGCCCGC-GAAG-GAC-CTTAACGCCAGAAAATGGTCGGTGAAGACCAGT-TCCGCTTCA 182 | ||||| |||| || ||| | | || | || | || || | |||| |||| Sbjct 21068 GACCCGCCGAAGCGAGTCTTGGGTCTAAAAGAAGGG-GTTGTTACCCCGCCTCCGATTCA 21010 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242 || ||||||||| |||| ||| ||||||||||||||||||||||| | ||||||| Sbjct 21009 CGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCGGA---GCTCCCA 20953 Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 20952 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 20893 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 20892 CTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTA 20833 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 20832 GACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 20773 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 20772 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 20713 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 20712 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 20660 Score = 661 bits (732), Expect = 0.0 Identities = 471/533 (88%), Gaps = 11/533 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 59732 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 59673 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 59672 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATC 59613 Query 127 GGCCCGC-GAAG-GAC-CTTAACGCCAGAAAATGGTCGGTGAAGACCAGT-TCCGCTTCA 182 | ||||| |||| || ||| | | || | || | || || | |||| |||| Sbjct 59612 GACCCGCCGAAGCGAGTCTTGGGTCTAAAAGAAGGG-GTTGTTACCCCGCCTCCGATTCA 59554 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242 || ||| ||||| |||| ||| ||||||||||||||||||||||| | ||||||| Sbjct 59553 CAGACTAAATAAAATAACGTTAAATGTAGTGGTATTTCACTTGCGCCGGA---GCTCCCA 59497 Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 59496 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 59437 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 ||||||||||||||||||| || |||||||| ||||||||||||||||| ||||||| Sbjct 59436 CTTCTTTCCCCGCTGATTCTGCAAAGCCCGTCCCCTTGGCTGTGGTTTCT---GATAGTA 59380 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 59379 GACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 59320 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 59319 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 59260 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||| |||||||||||||| | |||| Sbjct 59259 TTCTTCACTTTGACATTCAGAGCACTGGGCTGAAATCACATTGCGATAGCATC 59207 Score = 636 bits (704), Expect = 5e-180 Identities = 465/533 (87%), Gaps = 8/533 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||| |||| |||| | ||||||||||||||||||| Sbjct 130088 CTTTTGTTCCACACGAGATTTCTATTCTTGTTGAGCTCATCTTAGGACACCTGCGTTATC 130029 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||| ||||||||||||| ||||||||||||||||||||||||| || |||||||| Sbjct 130028 TGTTAACGGATGTGCCGCCCCCGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATC 129969 Query 127 GGCCCGC-GAAG-GAC-CTTAACGCCAGAAAATGGTCGGTGAAGACCAGT-TCCGCTTCA 182 | ||||| |||| || ||| | | || | || | || || | |||| |||| Sbjct 129968 GACCCGCCGAAGCGAGTCTTGGGTCTAAAAGAAGGG-GTTGTTACCCCGCCTCCGATTCA 129910 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242 || ||||||||| |||| ||| ||||||||||||||||||||||| | ||||||| Sbjct 129909 CGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCGGA---GCTCCCA 129853 Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 129852 CTTATTCTACACCTCTCAAGTCATTTCCCAAAGTCGGACTATAGTCAAGCTCAACAGGGT 129793 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 |||||||| |||||||||| ||||||||| |||||||||| ||||||||||| ||||||| Sbjct 129792 CTTCTTTCTCCGCTGATTCTGCCAAGCCCATTCCCTTGGCAGTGGTTTCGCTGGATAGTA 129733 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 129732 GACAGGGACAGTGAGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 129673 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 129672 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAA 129613 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||| |||| |||||||||||||||||| | |||| Sbjct 129612 TTCTTCACTTTGACATTCAGAGAACTGTGCAGAAATCACATTGCGTTAGCATC 129560 Score = 618 bits (684), Expect = 1e-174 Identities = 461/533 (86%), Gaps = 8/533 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||| |||| |||| | ||||||||||||||||||| Sbjct 137023 CTTTTGTTCCACACGAGATTTCTATTCTTGTTGAGCTCATCTTAGGACACCTGCGTTATC 136964 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||| ||||||||||||| ||||||||||||||||||||||||| || || ||||| Sbjct 136963 TGTTAACGGATGTGCCGCCCCCGCCAAACTCCCCACCTGACAATGTCCTCCGCCTGGATC 136904 Query 127 GGCCCGC-GAAG-GAC-CTTAACGCCAGAAAATGGTCGGTGAAGACCAGT-TCCGCTTCA 182 | | || |||| || ||| | | || | || | || || | || | |||| Sbjct 136903 GACAAGCCGAAGTGAGTCTTGGGTCTAAAAGAAGGG-GTTGTTACCCCGCCTCAGATTCA 136845 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242 || ||||||||| |||| ||| ||||||||||||||||||||||| | ||||||| Sbjct 136844 CGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCGGA---GCTCCCA 136788 Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 136787 CTTATTCTACACCTCTCAAGTCATTTCCCAAAGTCGGACTATAGTCAAGCTCAACAGGGT 136728 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 |||||||| |||||||||| ||||||||| |||||||||| ||||||||||| ||||||| Sbjct 136727 CTTCTTTCTCCGCTGATTCTGCCAAGCCCATTCCCTTGGCAGTGGTTTCGCTGGATAGTA 136668 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 136667 GACAGGGACAGTGAGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 136608 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 136607 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAA 136548 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||| |||| |||||||||||||||||| | |||| Sbjct 136547 TTCTTCACTTTGACATTCAGAGAACTGTGCAGAAATCACATTGCGTTAGCATC 136495 Score = 150 bits (166), Expect = 6e-34 Identities = 106/121 (88%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| | ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 83300 CTTTTGTTACACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 83241 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 83240 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATC 83181 Query 127 G 127 | Sbjct 83180 G 83180 >seq10 Length=550871 Score = 569 bits (630), Expect = 7e-160 Identities = 401/455 (88%), Gaps = 15/455 (3%) Strand=Plus/Minus Query 86 CCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGAAGGAC---CT 142 |||||||||||||||||| ||||||||| || |||||||||| ||||| || | | || Sbjct 17476 CCAGCCAAACTCCCCACCAGACAATGTCCTCCACCCGGATCGACCCGCCAAAGCCAGTCT 17417 Query 143 TAACGCCAGA--AAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaC 200 | | | | || ||| | | | || |||| |||| || ||||||||| || Sbjct 17416 TGGGTCTAAAGGAAGGGGTTGTT--ACCCCGCCTCCGATTCACGGAGTAAGTAAAATAAT 17359 Query 201 GATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCA 260 | ||| ||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct 17358 GTTAAAAGTAGTGGTATTTCACTTGCGCCGGA---GCTCCCACTTATTCTACACCTCTCA 17302 Query 261 AGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATT 320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17301 AGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATT 17242 Query 321 CCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAAT 380 | |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct 17241 CTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAAT 17182 Query 381 CTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGA 440 |||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct 17181 CTCGTTAATCCATTCATGCGCGTCACTAATTAGA-----AGGCATTTGGCTACTTTAAGA 17127 Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 17126 GAGTCATAGTTACTCCCACCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 17067 Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||| | |||| Sbjct 17066 AGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 17032 Score = 488 bits (540), Expect = 2e-135 Identities = 288/300 (96%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 236 GCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 83281 GCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA 83222 Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355 | |||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 83221 ATAGGGTCTTCTTTTCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTAGTTTCGCAG 83162 Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 ||||||||| | | |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 83161 GATAGTAGACATGCACAGTGGGAATCTCGTTAATCCATTCATGCACGTCACTAATTAGAT 83102 Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 83101 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 83042 Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 83041 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 82982 Score = 131 bits (144), Expect = 5e-28 Identities = 107/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| ||| ||||||| ||||||||||| Sbjct 83454 CTTTTGTTCCACACGAGATTTCTGTTCTCGTCGAGCTTATCTTAGGAAACCTGCGTTATC 83395 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||| |||||||||||||||||||||||| |||||| |||||| || ||| ||||| Sbjct 83394 TTTTAACAAATGTGCCGCCCCAGCCAAACTCCCGACCTGATAATGTCCTCCACCTGGATC 83335 Query 127 GGCCCGCGAA 136 | | ||| || Sbjct 83334 GACACGCCAA 83325 >seq77 Length=66831 Score = 562 bits (622), Expect = 1e-157 Identities = 442/533 (83%), Gaps = 37/533 (7%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 15127 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 15068 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||| ||| |||||||||||||||||||||| || |||| |||| Sbjct 15067 TTTTAACAGATGTGCCGCCCTAGCAAAACTCCCCACCTGACAATGTCCTCCACCCCGATC 15008 Query 127 GGCCCGCGAAGGAC---CTTAACGCCAGAAAATGGTCGGTGA-AGACCAGTTCCGCTTCA 182 | ||||| || | ||| | | || | || | || | || |||| |||| Sbjct 15007 GACCCGCCAAAGCGAGTCTTGGGTCTAAAAGAAGGG-GTTGTTACCCCCCCTCCGATTCA 14949 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242 || ||||||||| |||| ||| ||||||||||||||||||||||| | ||||||| Sbjct 14948 CGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCGGA---GCTCCCA 14892 Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 14891 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAGTTGGGT 14832 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 ||||||||||||||||||| |||| |||||||||||||||||||| Sbjct 14831 CTTCTTTCCCCGCTGATTCTACCAACCCCGTTCCCTTGGCTGTGGT-------------- 14786 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14785 ---------------AATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 14741 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14740 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 14681 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 14680 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 14628 >seq20 Length=193719 Score = 499 bits (552), Expect = 1e-138 Identities = 291/301 (97%), Gaps = 0/301 (0%) Strand=Plus/Minus Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294 ||||||||||||| |||||||||||| ||| ||||||||||| |||||||||||||||| Sbjct 130674 GGCTCCCACTTATGCTACACCTCTCATGTCTCTTCACAAAGTCAGACTAGAGTCAAGCTC 130615 Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 130614 AACAGGGTCTTCTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 130555 Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 130554 AGATAGTAGTTAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 130495 Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 130494 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 130435 Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct 130434 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCAT 130375 Query 535 C 535 | Sbjct 130374 C 130374 Score = 331 bits (366), Expect = 3e-88 Identities = 197/206 (96%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 330 CCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAAT 389 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct 106764 CCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAAT 106705 Query 390 CCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAG 449 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 106704 CCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGACTACCTTAAGAGAGTCATAG 106645 Query 450 TTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTG 509 |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct 106644 TTACTCCCGCTGTTTACCCGCACTTGGTTGAATTTCTTCACTTTGACATTCAGAGCATTG 106585 Query 510 GGCAGAAATCACATTGCGTCAACATC 535 || |||||||||||||||| | |||| Sbjct 106584 GGAAGAAATCACATTGCGTTAGCATC 106559 Score = 163 bits (180), Expect = 9e-38 Identities = 116/132 (88%), Gaps = 1/132 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 80273 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 80214 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 80213 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATC 80154 Query 127 GGCCCG-CGAAG 137 | |||| ||||| Sbjct 80153 GACCCGCCGAAG 80142 Score = 116 bits (128), Expect = 1e-23 Identities = 90/107 (84%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| ||||||| ||| |||| ||||||||||||||||||| Sbjct 131113 CTTTTGCTCTACGCGAGGTTTCTGTCCTCACTGAGCTGGCCTTAGGACACCTGCGTTACC 131054 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| |||||||| ||||||||| |||||||||| |||||||||||| Sbjct 131053 TTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACAATGTC 131007 >seq57 Length=90757 Score = 470 bits (520), Expect = 5e-130 Identities = 284/300 (95%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 236 GCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA 295 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 57021 GCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTGGGACTAGAGTCAAGCTCA 56962 Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355 ||| |||||||| ||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 56961 ACATGGTCTTCTCTCCCCGCTGATTCTGCCAAGCCTGTTCCCTTGGCTGTGGTTTCGCTG 56902 Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 56901 AATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 56842 Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475 ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 56841 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCATCTACCCGCGCTTT 56782 Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||| ||||||||||||||||||||||||||||||||||| ||| | |||| Sbjct 56781 GTTGAATTTCTTACCTTTGACATTCAGAGCACTGGGCAGAAATCACATTACGTTAGCATC 56722 Score = 132 bits (146), Expect = 2e-28 Identities = 102/121 (84%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||| || | || |||| | ||||||||||||||||||| Sbjct 57191 CTTTTGTTCCACAAGAGATTTTTGGTTTCGTTGAGCTCGTCTTAGGACACCTGCGTTATC 57132 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||| |||| ||||||||||||||||||||||||||||||||| || |||||||| Sbjct 57131 TTTTAACAAATGTTCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCTGCCCGGATC 57072 Query 127 G 127 | Sbjct 57071 G 57071 >seq3939 Length=913 Score = 430 bits (476), Expect = 4e-118 Identities = 275/299 (92%), Gaps = 3/299 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 296 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTGTT 237 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 236 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 177 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||| Sbjct 176 GGCCCGCGAAGGACCTTAACGCCAGAAGATGGGCGGTGAAGCCCAGTTCCGCTTCATTGA 117 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||||||||| ||||||||||||||||| |||||| | |||||||| || Sbjct 116 ATAAGTAAAAAAACGATAAAGGTAGTGGTATTTCACTGGCGCCGGA---GCTCCCACCTA 60 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 ||||||||| | | ||| |||||||| ||| |||||||||||||||||||||||||| Sbjct 59 TTCTACACCCCATATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 1 >seq2 Length=52886895 Score = 122 bits (134), Expect = 3e-25 Identities = 96/114 (84%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || || ||| |||||| ||||||| | || | ||||||||||||||||||| Sbjct 45063036 CTTGTGTTCCACAACAGATTTATGTTCTCGTTAAGCTCATCTTAGGACACCTGCGTTATC 45062977 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACC 120 ||||| |||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 45062976 TTTTAA-AGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCACC 45062924 Score = 111 bits (122), Expect = 5e-22 Identities = 63/64 (98%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 461 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 45062721 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTTAGAGCACTGGGCAGAAATCA 45062662 Query 521 CATT 524 |||| Sbjct 45062661 CATT 45062658 Score = 91.5 bits (100), Expect = 5e-16 Identities = 67/77 (87%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 62 TTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCC 121 |||| ||||||||||| |||||||||||||||||||||||||||||||||| || || Sbjct 4505526 TTATCTTTTAACAGATGGGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGTCC 4505585 Query 122 GGATCGGCCCG-CGAAG 137 | |||| |||| ||||| Sbjct 4505586 GAATCGACCCGCCGAAG 4505602 >seq32886 Length=360271 Score = 78.8 bits (86), Expect = 3e-12 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 ||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| |||| Sbjct 81712 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 81771 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 ||||||||| || ||| | ||||||| |||||||||||| | |||| Sbjct 81772 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTT 81817 Score = 78.8 bits (86), Expect = 3e-12 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 ||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| |||| Sbjct 251744 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 251803 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 ||||||||| || ||| | ||||||| |||||||||||| | |||| Sbjct 251804 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTT 251849 >seq8 Length=41758685 Score = 78.8 bits (86), Expect = 3e-12 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 ||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| |||| Sbjct 33278299 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 33278240 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 ||||||||| || ||| | ||||||| |||||||||||| | |||| Sbjct 33278239 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTT 33278194 >seq3 Length=64984695 Score = 78.8 bits (86), Expect = 3e-12 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 ||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| |||| Sbjct 37540395 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 37540336 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 ||||||||| || ||| | ||||||| |||||||||||| | |||| Sbjct 37540335 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTT 37540290 >seq7154 Length=660 Score = 75.2 bits (82), Expect = 4e-11 Identities = 44/46 (96%), Gaps = 0/46 (0%) Strand=Plus/Plus Query 50 AGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAAC 95 |||||||||||||||| |||||||||||||||||||||||||||| Sbjct 615 AGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAAC 660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634662248128