Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Brassica_20oleracea_20var._20oleracea_20[refseq_20GCF_5F000695525.1_
202014-05-27] 32,886 sequences; 488,954,160 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq736 762 0.0
seq22 693 0.0
seq10 569 7e-160
seq77 562 1e-157
seq20 499 1e-138
seq57 470 5e-130
seq3939 430 4e-118
seq2 122 3e-25
seq32886 78.8 3e-12
seq8 78.8 3e-12
seq3 78.8 3e-12
seq7154 75.2 4e-11
>seq736
Length=7293
Score = 762 bits (844), Expect = 0.0
Identities = 491/535 (92%), Gaps = 4/535 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 6537 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 6478
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 6477 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCAACCCGGGTC 6418
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||||||||| |||||| ||| || |||| |||| |||||||| |||
Sbjct 6417 GGCCCGCGAAGGACCTTAAGACCAGAAGTTGGACGATGAAT-CCAGCCCCGCTTCACTGA 6359
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||||||| ||| | |||| |||||||||| |||||||| |||||| | ||
Sbjct 6358 GTAAGTAAAAAAACAATAGGAGTAGAGGTATTTCACCGGCGCCGAA---GCTCCCTCCTA 6302
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
||||||||||| | ||| |||||||| ||| |||||||||||||||||||||||||||
Sbjct 6301 TTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 6242
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
|||||||||||||| || |||||||||||||| |||||||||||||||||||| |||||
Sbjct 6241 TTTCCCCGCTGATTTTGCGAAGCCCGTTCCCTTCGCTGTGGTTTCGCTAGATAGGAGATA 6182
Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6181 GGGACAGGGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 6122
Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 6121 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTACT 6062
Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTC 541
||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 6061 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCGCTTTC 6007
>seq22
Length=192287
Score = 693 bits (768), Expect = 0.0
Identities = 478/533 (90%), Gaps = 8/533 (2%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || ||| ||||||||||||||| |||| | |||||||||||||| ||||
Sbjct 21188 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCATTATC 21129
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 21128 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATC 21069
Query 127 GGCCCGC-GAAG-GAC-CTTAACGCCAGAAAATGGTCGGTGAAGACCAGT-TCCGCTTCA 182
| ||||| |||| || ||| | | || | || | || || | |||| ||||
Sbjct 21068 GACCCGCCGAAGCGAGTCTTGGGTCTAAAAGAAGGG-GTTGTTACCCCGCCTCCGATTCA 21010
Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242
|| ||||||||| |||| ||| ||||||||||||||||||||||| | |||||||
Sbjct 21009 CGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCGGA---GCTCCCA 20953
Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 20952 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 20893
Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 20892 CTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTA 20833
Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 20832 GACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 20773
Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 20772 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 20713
Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 20712 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 20660
Score = 661 bits (732), Expect = 0.0
Identities = 471/533 (88%), Gaps = 11/533 (2%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 59732 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 59673
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 59672 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATC 59613
Query 127 GGCCCGC-GAAG-GAC-CTTAACGCCAGAAAATGGTCGGTGAAGACCAGT-TCCGCTTCA 182
| ||||| |||| || ||| | | || | || | || || | |||| ||||
Sbjct 59612 GACCCGCCGAAGCGAGTCTTGGGTCTAAAAGAAGGG-GTTGTTACCCCGCCTCCGATTCA 59554
Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242
|| ||| ||||| |||| ||| ||||||||||||||||||||||| | |||||||
Sbjct 59553 CAGACTAAATAAAATAACGTTAAATGTAGTGGTATTTCACTTGCGCCGGA---GCTCCCA 59497
Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 59496 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 59437
Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362
||||||||||||||||||| || |||||||| ||||||||||||||||| |||||||
Sbjct 59436 CTTCTTTCCCCGCTGATTCTGCAAAGCCCGTCCCCTTGGCTGTGGTTTCT---GATAGTA 59380
Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 59379 GACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 59320
Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 59319 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 59260
Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||||||||||||||||||||| |||||||||||||| | ||||
Sbjct 59259 TTCTTCACTTTGACATTCAGAGCACTGGGCTGAAATCACATTGCGATAGCATC 59207
Score = 636 bits (704), Expect = 5e-180
Identities = 465/533 (87%), Gaps = 8/533 (2%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || ||| ||||||||| |||| |||| | |||||||||||||||||||
Sbjct 130088 CTTTTGTTCCACACGAGATTTCTATTCTTGTTGAGCTCATCTTAGGACACCTGCGTTATC 130029
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||| ||||||||||||| ||||||||||||||||||||||||| || ||||||||
Sbjct 130028 TGTTAACGGATGTGCCGCCCCCGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATC 129969
Query 127 GGCCCGC-GAAG-GAC-CTTAACGCCAGAAAATGGTCGGTGAAGACCAGT-TCCGCTTCA 182
| ||||| |||| || ||| | | || | || | || || | |||| ||||
Sbjct 129968 GACCCGCCGAAGCGAGTCTTGGGTCTAAAAGAAGGG-GTTGTTACCCCGCCTCCGATTCA 129910
Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242
|| ||||||||| |||| ||| ||||||||||||||||||||||| | |||||||
Sbjct 129909 CGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCGGA---GCTCCCA 129853
Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302
||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 129852 CTTATTCTACACCTCTCAAGTCATTTCCCAAAGTCGGACTATAGTCAAGCTCAACAGGGT 129793
Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362
|||||||| |||||||||| ||||||||| |||||||||| ||||||||||| |||||||
Sbjct 129792 CTTCTTTCTCCGCTGATTCTGCCAAGCCCATTCCCTTGGCAGTGGTTTCGCTGGATAGTA 129733
Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422
|| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 129732 GACAGGGACAGTGAGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 129673
Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 129672 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAA 129613
Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||||||||||||| |||| |||||||||||||||||| | ||||
Sbjct 129612 TTCTTCACTTTGACATTCAGAGAACTGTGCAGAAATCACATTGCGTTAGCATC 129560
Score = 618 bits (684), Expect = 1e-174
Identities = 461/533 (86%), Gaps = 8/533 (2%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || ||| ||||||||| |||| |||| | |||||||||||||||||||
Sbjct 137023 CTTTTGTTCCACACGAGATTTCTATTCTTGTTGAGCTCATCTTAGGACACCTGCGTTATC 136964
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||| ||||||||||||| ||||||||||||||||||||||||| || || |||||
Sbjct 136963 TGTTAACGGATGTGCCGCCCCCGCCAAACTCCCCACCTGACAATGTCCTCCGCCTGGATC 136904
Query 127 GGCCCGC-GAAG-GAC-CTTAACGCCAGAAAATGGTCGGTGAAGACCAGT-TCCGCTTCA 182
| | || |||| || ||| | | || | || | || || | || | ||||
Sbjct 136903 GACAAGCCGAAGTGAGTCTTGGGTCTAAAAGAAGGG-GTTGTTACCCCGCCTCAGATTCA 136845
Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242
|| ||||||||| |||| ||| ||||||||||||||||||||||| | |||||||
Sbjct 136844 CGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCGGA---GCTCCCA 136788
Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302
||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 136787 CTTATTCTACACCTCTCAAGTCATTTCCCAAAGTCGGACTATAGTCAAGCTCAACAGGGT 136728
Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362
|||||||| |||||||||| ||||||||| |||||||||| ||||||||||| |||||||
Sbjct 136727 CTTCTTTCTCCGCTGATTCTGCCAAGCCCATTCCCTTGGCAGTGGTTTCGCTGGATAGTA 136668
Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422
|| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 136667 GACAGGGACAGTGAGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 136608
Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 136607 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAA 136548
Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||||||||||||| |||| |||||||||||||||||| | ||||
Sbjct 136547 TTCTTCACTTTGACATTCAGAGAACTGTGCAGAAATCACATTGCGTTAGCATC 136495
Score = 150 bits (166), Expect = 6e-34
Identities = 106/121 (88%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| | ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 83300 CTTTTGTTACACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 83241
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 83240 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATC 83181
Query 127 G 127
|
Sbjct 83180 G 83180
>seq10
Length=550871
Score = 569 bits (630), Expect = 7e-160
Identities = 401/455 (88%), Gaps = 15/455 (3%)
Strand=Plus/Minus
Query 86 CCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGAAGGAC---CT 142
|||||||||||||||||| ||||||||| || |||||||||| ||||| || | | ||
Sbjct 17476 CCAGCCAAACTCCCCACCAGACAATGTCCTCCACCCGGATCGACCCGCCAAAGCCAGTCT 17417
Query 143 TAACGCCAGA--AAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaC 200
| | | | || ||| | | | || |||| |||| || ||||||||| ||
Sbjct 17416 TGGGTCTAAAGGAAGGGGTTGTT--ACCCCGCCTCCGATTCACGGAGTAAGTAAAATAAT 17359
Query 201 GATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCA 260
| ||| ||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct 17358 GTTAAAAGTAGTGGTATTTCACTTGCGCCGGA---GCTCCCACTTATTCTACACCTCTCA 17302
Query 261 AGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATT 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 17301 AGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATT 17242
Query 321 CCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAAT 380
| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct 17241 CTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAAT 17182
Query 381 CTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGA 440
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 17181 CTCGTTAATCCATTCATGCGCGTCACTAATTAGA-----AGGCATTTGGCTACTTTAAGA 17127
Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 17126 GAGTCATAGTTACTCCCACCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 17067
Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||||||||||||||||||| | ||||
Sbjct 17066 AGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 17032
Score = 488 bits (540), Expect = 2e-135
Identities = 288/300 (96%), Gaps = 0/300 (0%)
Strand=Plus/Minus
Query 236 GCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 83281 GCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA 83222
Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355
| |||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 83221 ATAGGGTCTTCTTTTCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTAGTTTCGCAG 83162
Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415
||||||||| | | |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 83161 GATAGTAGACATGCACAGTGGGAATCTCGTTAATCCATTCATGCACGTCACTAATTAGAT 83102
Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 83101 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 83042
Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 83041 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 82982
Score = 131 bits (144), Expect = 5e-28
Identities = 107/130 (82%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || ||| ||||||||||||||| ||| ||||||| |||||||||||
Sbjct 83454 CTTTTGTTCCACACGAGATTTCTGTTCTCGTCGAGCTTATCTTAGGAAACCTGCGTTATC 83395
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||| |||||||||||||||||||||||| |||||| |||||| || ||| |||||
Sbjct 83394 TTTTAACAAATGTGCCGCCCCAGCCAAACTCCCGACCTGATAATGTCCTCCACCTGGATC 83335
Query 127 GGCCCGCGAA 136
| | ||| ||
Sbjct 83334 GACACGCCAA 83325
>seq77
Length=66831
Score = 562 bits (622), Expect = 1e-157
Identities = 442/533 (83%), Gaps = 37/533 (7%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 15127 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 15068
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||| ||| |||||||||||||||||||||| || |||| ||||
Sbjct 15067 TTTTAACAGATGTGCCGCCCTAGCAAAACTCCCCACCTGACAATGTCCTCCACCCCGATC 15008
Query 127 GGCCCGCGAAGGAC---CTTAACGCCAGAAAATGGTCGGTGA-AGACCAGTTCCGCTTCA 182
| ||||| || | ||| | | || | || | || | || |||| ||||
Sbjct 15007 GACCCGCCAAAGCGAGTCTTGGGTCTAAAAGAAGGG-GTTGTTACCCCCCCTCCGATTCA 14949
Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242
|| ||||||||| |||| ||| ||||||||||||||||||||||| | |||||||
Sbjct 14948 CGGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCGGA---GCTCCCA 14892
Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 14891 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAGTTGGGT 14832
Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362
||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct 14831 CTTCTTTCCCCGCTGATTCTACCAACCCCGTTCCCTTGGCTGTGGT-------------- 14786
Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 14785 ---------------AATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 14741
Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 14740 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 14681
Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 14680 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 14628
>seq20
Length=193719
Score = 499 bits (552), Expect = 1e-138
Identities = 291/301 (97%), Gaps = 0/301 (0%)
Strand=Plus/Minus
Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294
||||||||||||| |||||||||||| ||| ||||||||||| ||||||||||||||||
Sbjct 130674 GGCTCCCACTTATGCTACACCTCTCATGTCTCTTCACAAAGTCAGACTAGAGTCAAGCTC 130615
Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 130614 AACAGGGTCTTCTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 130555
Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 130554 AGATAGTAGTTAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 130495
Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 130494 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 130435
Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 130434 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCAT 130375
Query 535 C 535
|
Sbjct 130374 C 130374
Score = 331 bits (366), Expect = 3e-88
Identities = 197/206 (96%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 330 CCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAAT 389
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 106764 CCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAAT 106705
Query 390 CCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAG 449
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 106704 CCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGACTACCTTAAGAGAGTCATAG 106645
Query 450 TTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTG 509
|||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 106644 TTACTCCCGCTGTTTACCCGCACTTGGTTGAATTTCTTCACTTTGACATTCAGAGCATTG 106585
Query 510 GGCAGAAATCACATTGCGTCAACATC 535
|| |||||||||||||||| | ||||
Sbjct 106584 GGAAGAAATCACATTGCGTTAGCATC 106559
Score = 163 bits (180), Expect = 9e-38
Identities = 116/132 (88%), Gaps = 1/132 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 80273 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 80214
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 80213 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATC 80154
Query 127 GGCCCG-CGAAG 137
| |||| |||||
Sbjct 80153 GACCCGCCGAAG 80142
Score = 116 bits (128), Expect = 1e-23
Identities = 90/107 (84%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||||||||| ||| ||||||| ||| |||| |||||||||||||||||||
Sbjct 131113 CTTTTGCTCTACGCGAGGTTTCTGTCCTCACTGAGCTGGCCTTAGGACACCTGCGTTACC 131054
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| |||||||| ||||||||| |||||||||| ||||||||||||
Sbjct 131053 TTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACAATGTC 131007
>seq57
Length=90757
Score = 470 bits (520), Expect = 5e-130
Identities = 284/300 (95%), Gaps = 0/300 (0%)
Strand=Plus/Minus
Query 236 GCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA 295
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 57021 GCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTGGGACTAGAGTCAAGCTCA 56962
Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355
||| |||||||| ||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 56961 ACATGGTCTTCTCTCCCCGCTGATTCTGCCAAGCCTGTTCCCTTGGCTGTGGTTTCGCTG 56902
Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 56901 AATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 56842
Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475
||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 56841 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCATCTACCCGCGCTTT 56782
Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||| ||||||||||||||||||||||||||||||||||| ||| | ||||
Sbjct 56781 GTTGAATTTCTTACCTTTGACATTCAGAGCACTGGGCAGAAATCACATTACGTTAGCATC 56722
Score = 132 bits (146), Expect = 2e-28
Identities = 102/121 (84%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || ||| ||||||| || | || |||| | |||||||||||||||||||
Sbjct 57191 CTTTTGTTCCACAAGAGATTTTTGGTTTCGTTGAGCTCGTCTTAGGACACCTGCGTTATC 57132
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||| |||| ||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 57131 TTTTAACAAATGTTCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCTGCCCGGATC 57072
Query 127 G 127
|
Sbjct 57071 G 57071
>seq3939
Length=913
Score = 430 bits (476), Expect = 4e-118
Identities = 275/299 (92%), Gaps = 3/299 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 296 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTGTT 237
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 236 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 177
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||
Sbjct 176 GGCCCGCGAAGGACCTTAACGCCAGAAGATGGGCGGTGAAGCCCAGTTCCGCTTCATTGA 117
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
|||||||||||||||||| ||||||||||||||||| |||||| | |||||||| ||
Sbjct 116 ATAAGTAAAAAAACGATAAAGGTAGTGGTATTTCACTGGCGCCGGA---GCTCCCACCTA 60
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305
||||||||| | | ||| |||||||| ||| ||||||||||||||||||||||||||
Sbjct 59 TTCTACACCCCATATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 1
>seq2
Length=52886895
Score = 122 bits (134), Expect = 3e-25
Identities = 96/114 (84%), Gaps = 1/114 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| || || ||| |||||| ||||||| | || | |||||||||||||||||||
Sbjct 45063036 CTTGTGTTCCACAACAGATTTATGTTCTCGTTAAGCTCATCTTAGGACACCTGCGTTATC 45062977
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACC 120
||||| |||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 45062976 TTTTAA-AGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCACC 45062924
Score = 111 bits (122), Expect = 5e-22
Identities = 63/64 (98%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 461 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 45062721 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTTAGAGCACTGGGCAGAAATCA 45062662
Query 521 CATT 524
||||
Sbjct 45062661 CATT 45062658
Score = 91.5 bits (100), Expect = 5e-16
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 62 TTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCC 121
|||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||
Sbjct 4505526 TTATCTTTTAACAGATGGGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGTCC 4505585
Query 122 GGATCGGCCCG-CGAAG 137
| |||| |||| |||||
Sbjct 4505586 GAATCGACCCGCCGAAG 4505602
>seq32886
Length=360271
Score = 78.8 bits (86), Expect = 3e-12
Identities = 81/106 (76%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| ||||
Sbjct 81712 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 81771
Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
||||||||| || ||| | ||||||| |||||||||||| | ||||
Sbjct 81772 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTT 81817
Score = 78.8 bits (86), Expect = 3e-12
Identities = 81/106 (76%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| ||||
Sbjct 251744 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 251803
Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
||||||||| || ||| | ||||||| |||||||||||| | ||||
Sbjct 251804 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTT 251849
>seq8
Length=41758685
Score = 78.8 bits (86), Expect = 3e-12
Identities = 81/106 (76%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| ||||
Sbjct 33278299 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 33278240
Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
||||||||| || ||| | ||||||| |||||||||||| | ||||
Sbjct 33278239 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTT 33278194
>seq3
Length=64984695
Score = 78.8 bits (86), Expect = 3e-12
Identities = 81/106 (76%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
||||| ||| |||||| |||||| ||| ||| ||| ||| ||| ||| ||||
Sbjct 37540395 GACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTC 37540336
Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474
||||||||| || ||| | ||||||| |||||||||||| | ||||
Sbjct 37540335 GCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTT 37540290
>seq7154
Length=660
Score = 75.2 bits (82), Expect = 4e-11
Identities = 44/46 (96%), Gaps = 0/46 (0%)
Strand=Plus/Plus
Query 50 AGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAAC 95
|||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 615 AGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAAC 660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634662248128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |