Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq21727 154 3e-35 seq29758 125 1e-26 seq615 86.0 1e-14 seq36536 80.6 5e-13 seq246 80.6 5e-13 >seq21727 Length=331 Score = 154 bits (170), Expect = 3e-35 Identities = 148/190 (78%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 145 AGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCTAGACGCGAAACCT 204 || || || ||||||||| || ||||||||| |||| || || ||||| ||||||| Sbjct 286 AGGCGCAGCGAAAGCGAGTCTGAACAGGGCGTTCAGTTCGTCGCATTAGACCCGAAACCG 227 Query 205 TGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGACCGAACCGGT 264 |||||||| ||| ||||||||||||| |||||| | |||||||||||||| | Sbjct 226 AGTGATCTAGCCATGAGCAGGTTGAAGGTTGGGTAACACCAACTGGAGGACCGAACCCGC 167 Query 265 AAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCAATCAAACTGGGA 324 | |||| || || |||||||| | || |||||||||||||||||||||||| ||| Sbjct 166 ATCTGTTGCAATAGATTGGGATGACTTGTGGTTAGGGGTGAAAGGCCAATCAAACTCGGA 107 Query 325 AATAGCTCGT 334 ||||||| || Sbjct 106 AATAGCTGGT 97 >seq29758 Length=241 Score = 125 bits (138), Expect = 1e-26 Identities = 162/219 (74%), Gaps = 10/219 (5%) Strand=Plus/Minus Query 45 ACAAGCGGTCGGAGCCGAGTGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGA 104 |||||| |||||||| | | | |||||||||| ||||||| |||||| | | ||| Sbjct 241 ACAAGCAGTCGGAGCGGCCCTGTGCCGTGACGGCGTACCTTTTGTATAATGGGTCAGCGA 182 Query 105 GTTAGTCGTCACCAGCGAGGTTAAGGGCTTCAGGCCCGTT-AGCCGAAGTGAAAGCGAGC 163 |||| || ||||||| ||||| | || || || || || ||||||||| Sbjct 181 CTTAGA-GTATGCAGCGAGCTTAAG-----CCGGTAGGTGGAGGCGCAGCGAAAGCGAGT 128 Query 164 CTTAACAGGGCGACG--AGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAG 221 || ||||||||| || ||||| || |||||| |||||||| ||||||| ||| | | Sbjct 127 CTGAACAGGGCG-CGTCAGTTGCATGCTCTAGACCCGAAACCTGATGATCTAGCCATGGG 69 Query 222 CAGGTTGAAGTCGCGGTAACGCGTGATGGAGGACCGAAC 260 |||||||||| |||||||| || ||||||||||||| Sbjct 68 CAGGTTGAAGGTGCGGTAACACGCACTGGAGGACCGAAC 30 >seq615 Length=141330 Score = 86.0 bits (94), Expect = 1e-14 Identities = 212/315 (67%), Gaps = 14/315 (4%) Strand=Plus/Minus Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAG---CCGAGT---- 64 |||| |||||||||| | |||| ||| || ||||| || |||| || || Sbjct 69849 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCCAGCCCGG 69790 Query 65 GATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGG 124 || || |||| |||||||| ||| | |||||||| |||| | | | | || || || Sbjct 69789 GACTC--TGACCGCGTGCCTGTTGAAGAATGAGCCAACGACTCA-TAGGCAGTGGCTTGG 69733 Query 125 TTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGG 184 ||||||| | ||| ||||| || ||||||||| ||| | ||||| | || Sbjct 69732 TTAAGGGAAACCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCAC 69677 Query 185 TGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCG 244 || | ||| |||| | |||||||| ||| || |||| ||||| ||| | | Sbjct 69676 TGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACT 69617 Query 245 TGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTG 304 |||||| |||||||| | |||||| | | ||||||| | | || |||||||| Sbjct 69616 AAGTGGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTG 69557 Query 305 AAAGGCCAATCAAAC 319 ||| |||| || ||| Sbjct 69556 AAATGCCACTCGAAC 69542 >seq36536 Length=153841 Score = 80.6 bits (88), Expect = 5e-13 Identities = 211/315 (67%), Gaps = 14/315 (4%) Strand=Plus/Plus Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAG---CCGAGT---- 64 |||| |||||||||| | |||| ||| || ||||| || |||| || || Sbjct 105499 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCCAGCCCGG 105558 Query 65 GATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGG 124 || || |||| |||||||| ||| | |||||||| ||| | | | | || || || Sbjct 105559 GACTC--TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGG 105615 Query 125 TTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGG 184 ||||||| | ||| ||||| || ||||||||| ||| | ||||| | || Sbjct 105616 TTAAGGGAAACCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCAC 105671 Query 185 TGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCG 244 || | ||| |||| | |||||||| ||| || |||| ||||| ||| | | Sbjct 105672 TGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACT 105731 Query 245 TGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTG 304 |||||| |||||||| | |||||| | | ||||||| | | || |||||||| Sbjct 105732 AAGTGGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTG 105791 Query 305 AAAGGCCAATCAAAC 319 ||| |||| || ||| Sbjct 105792 AAATGCCACTCGAAC 105806 Score = 80.6 bits (88), Expect = 5e-13 Identities = 211/315 (67%), Gaps = 14/315 (4%) Strand=Plus/Minus Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAG---CCGAGT---- 64 |||| |||||||||| | |||| ||| || ||||| || |||| || || Sbjct 132796 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCCAGCCCGG 132737 Query 65 GATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGG 124 || || |||| |||||||| ||| | |||||||| ||| | | | | || || || Sbjct 132736 GACTC--TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGG 132680 Query 125 TTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGG 184 ||||||| | ||| ||||| || ||||||||| ||| | ||||| | || Sbjct 132679 TTAAGGGAAACCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCAC 132624 Query 185 TGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCG 244 || | ||| |||| | |||||||| ||| || |||| ||||| ||| | | Sbjct 132623 TGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACT 132564 Query 245 TGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTG 304 |||||| |||||||| | |||||| | | ||||||| | | || |||||||| Sbjct 132563 AAGTGGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTG 132504 Query 305 AAAGGCCAATCAAAC 319 ||| |||| || ||| Sbjct 132503 AAATGCCACTCGAAC 132489 >seq246 Length=308227 Score = 80.6 bits (88), Expect = 5e-13 Identities = 211/315 (67%), Gaps = 14/315 (4%) Strand=Plus/Minus Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAG---CCGAGT---- 64 |||| |||||||||| | |||| ||| || ||||| || |||| || || Sbjct 245974 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCCAGCCCGG 245915 Query 65 GATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGG 124 || || |||| |||||||| ||| | |||||||| ||| | | | | || || || Sbjct 245914 GACTC--TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGG 245858 Query 125 TTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGG 184 ||||||| | ||| ||||| || ||||||||| ||| | ||||| | || Sbjct 245857 TTAAGGGAAACCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCAC 245802 Query 185 TGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCG 244 || | ||| |||| | |||||||| ||| || |||| ||||| ||| | | Sbjct 245801 TGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACT 245742 Query 245 TGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTG 304 |||||| |||||||| | |||||| | | ||||||| | | || |||||||| Sbjct 245741 AAGTGGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTG 245682 Query 305 AAAGGCCAATCAAAC 319 ||| |||| || ||| Sbjct 245681 AAATGCCACTCGAAC 245667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972444577792