Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq4632 129 3e-28 seq3929 129 3e-28 seq3472 129 3e-28 seq2406 129 3e-28 seq2238 116 2e-24 seq1597 102 5e-20 seq950 96.9 2e-18 seq6024 89.7 3e-16 >seq4632 Length=5156 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGC-GAGTCAAAATGATAACATCGCC 59 ||||||||||||||||||||||| ||||||||| ||| ||||| || |||||| | Sbjct 4309 GAACCCAAAGACTTTGATTTCTCATAAGGTGCC-AGCGGAGTCCTAAAAGCAACATCCGC 4367 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 4368 TGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 4425 >seq3929 Length=7564 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCG-AGTCAAAATGATAACATCGCC 59 ||||||||||||||||||||||| ||||||||| |||| |||| || |||||| | Sbjct 845 GAACCCAAAGACTTTGATTTCTCATAAGGTGCC-AGCGGAGTCCTAAAAGCAACATCCGC 787 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 786 TGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 729 >seq3472 Length=10196 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCG-AGTCAAAATGATAACATCGCC 59 ||||||||||||||||||||||| ||||||||| |||| |||| || |||||| | Sbjct 8773 GAACCCAAAGACTTTGATTTCTCATAAGGTGCC-AGCGGAGTCCTAAAAGCAACATCCGC 8715 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 8714 TGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 8657 >seq2406 Length=23699 Score = 129 bits (142), Expect = 3e-28 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGC-GAGTCAAAATGATAACATCGCC 59 ||||||||||||||||||||||| ||||||||| ||| ||||| || |||||| | Sbjct 3365 GAACCCAAAGACTTTGATTTCTCATAAGGTGCC-AGCGGAGTCCTAAAAGCAACATCCGC 3423 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 3424 TGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 3481 Score = 116 bits (128), Expect = 2e-24 Identities = 98/118 (83%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGC-GAGTCAAAATGATAACATCGCC 59 ||||||||||||||||||||||| ||||||||| ||| ||||| || |||||| | Sbjct 1036 GAACCCAAAGACTTTGATTTCTCATAAGGTGCC-AGCGGAGTCCTAAAAGCAACATCCAC 1094 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| ||||| || ||| | ||||||||||| || |||||||||||||||||| Sbjct 1095 TGATCCCTGGTCGGAATCGTTAATGGTTAAGACTAGGATAGTATCTGATCGTCTTCGA 1152 >seq2238 Length=26557 Score = 116 bits (128), Expect = 2e-24 Identities = 98/118 (83%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCG-AGTCAAAATGATAACATCGCC 59 |||||||||||||||||||| | ||||||||| |||| |||| || ||||| | Sbjct 26301 GAACCCAAAGACTTTGATTTATGATAAGGTGCC-AGCGGAGTCCTAAAAGCAACATTCAC 26243 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 26242 TGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 26185 >seq1597 Length=45033 Score = 102 bits (112), Expect = 5e-20 Identities = 95/118 (81%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGA-GTCAAAATGATAACATCGCC 59 ||| |||||||||| |||||||| ||||||||| ||||| ||| || ||||| | Sbjct 13954 GAATCCAAAGACTTCGATTTCTCATAAGGTGCC-AGCGAAGTCCTAAAAGCAACATTCGC 14012 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||| ||| |||| |||| |||||| |||||||||||||| ||||||| Sbjct 14013 TGATCCCTGGTCGACATCATTTATGGTTGAGACTAGGACGGTATCTGATCATCTTCGA 14070 >seq950 Length=86707 Score = 96.9 bits (106), Expect = 2e-18 Identities = 93/117 (79%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 2 AACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGC-GAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||| ||||||||| ||| ||||| || ||||| Sbjct 23176 AACCCAAAGACTTTGATTTCTCATAAGGTGCC-AGCAGAGTCCTAAAAGCAACATTTGTT 23118 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || |||| |||||||| ||||| |||| |||||| |||| ||||| || ||||||| Sbjct 23117 GACCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGATATCTAATTATCTTCGA 23061 Score = 96.9 bits (106), Expect = 2e-18 Identities = 93/117 (79%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 2 AACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGC-GAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||| ||||||||| ||| ||||| || ||||| Sbjct 46433 AACCCAAAGACTTTGATTTCTCATAAGGTGCC-AGCAGAGTCCTAAAAGCAACATTTGTT 46375 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || |||| |||||||| ||||| |||| |||||| |||| ||||| || ||||||| Sbjct 46374 GACCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGATATCTAATTATCTTCGA 46318 >seq6024 Length=2579 Score = 89.7 bits (98), Expect = 3e-16 Identities = 91/116 (78%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGC-GAGTCAAAATGATAACATCGCC 59 ||| ||||||||||||||||||| ||||||| | ||| ||||| || ||||| | Sbjct 1695 GAATCCAAAGACTTTGATTTCTCATAAGGTGTC-AGCGGAGTCCTAAAAGCAACATTCGC 1753 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 ||||||| || | ||| |||| | || |||||| |||||||||||||| ||||| Sbjct 1754 TGATCCCTGGTGGACATCATTTATGATTGAGACTAGGACGGTATCTGATCATCTTC 1809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278304641040