Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq16837 93.3 4e-17 seq21659 86.0 6e-15 seq2199 84.2 2e-14 >seq16837 Length=438 Score = 93.3 bits (102), Expect = 4e-17 Identities = 135/185 (73%), Gaps = 12/185 (6%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| || ||||||| ||| ||||| ||| |||||| ||||| |||| Sbjct 43 GGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTAATAGCCTGCGATAAGCTCCGGG 102 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC----GATATATT 122 || |||| ||| ||||||| |||| || |||||||| ||||| | ||| Sbjct 103 GAGGCGGCAAATATCCTGTGATCCGGAGATTTCTGAATGGGGAAACCCACCTGTCATAAG 162 Query 123 GGAGATA---TATCAT-AACGC-TAGGCGT--TAGGCGAACGTGGGGAACTGAAACATCT 175 | || || ||| || || | ||| | | ||||||||| |||||| |||||||||| Sbjct 163 GCAGGTATCGTATGATGAATACATAGTCATACGAGGCGAACGAGGGGAAGTGAAACATCT 222 Query 176 AAGTA 180 |||| Sbjct 223 CAGTA 227 >seq21659 Length=332 Score = 86.0 bits (94), Expect = 6e-15 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| | |||||| ||||||||||||| ||||||| |||| ||| Sbjct 72 GGTGGATGCCTTGGCATGCACAGGCGATGAAGGACGTGATACGCTGCGATAAGCCGTGGG 131 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || || ||| | ||||||| | ||| ||||||||||| ||||| Sbjct 132 GAGCTGCGAATAAGCTTTGATCCATGGATCTCCGAATGGGGGAACCC 178 >seq2199 Length=27138 Score = 84.2 bits (92), Expect = 2e-14 Identities = 84/108 (78%), Gaps = 1/108 (1%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| || ||||||| ||| ||||| ||| |||||| ||||| |||| Sbjct 9156 GGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTAATAGCCTGCGATAAGCTCCGGG 9215 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || |||| ||| ||||||| |||| || |||||||| ||||| Sbjct 9216 GAGGCGGCAAATATCCTGTGATCCGGAGATTTCTGAATGGGGAAACCC 9263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476631240216