Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 4e-18 seq36536 93.3 4e-17 seq615 93.3 4e-17 seq547 93.3 4e-17 seq246 93.3 4e-17 seq156 93.3 4e-17 seq41 93.3 4e-17 seq10 93.3 4e-17 seq1 77.0 3e-12 seq1735 75.2 1e-11 >seq3 Length=29476785 Score = 96.9 bits (106), Expect = 4e-18 Identities = 123/166 (74%), Gaps = 4/166 (2%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGT-TAAG 83 |||| |||||| || | ||| || ||||| ||| || ||| || | | | |||| Sbjct 9675414 AAACCGACACATGTGGGTAGGTAGAGAATACTTAGGGGCGCGAGACAA-CTCTCTCTAAG 9675472 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGG 143 ||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| || || Sbjct 9675473 GAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--GGGGG 9675530 Query 144 GCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 9675531 TCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 9675576 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 9538865 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 9538922 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 9538923 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 9538972 Score = 87.8 bits (96), Expect = 2e-15 Identities = 86/110 (78%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 9537754 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 9537697 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||| ||| || Sbjct 9537696 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACATAGGTCT 9537647 >seq36536 Length=153841 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 106700 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 106757 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 106758 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 106807 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 131595 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 131538 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 131537 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 131488 >seq615 Length=141330 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 57958 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 58015 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 58016 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 58065 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 61630 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 61573 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 61572 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 61523 Score = 87.8 bits (96), Expect = 2e-15 Identities = 90/117 (77%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 16877 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 16820 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | || |||| || ||| || ||| |||||||| |||||||||| | || ||| || Sbjct 16819 GGGGTTGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAAGTCTCTGCAAA 16763 >seq547 Length=157551 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 64307 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 64364 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 64365 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 64414 >seq246 Length=308227 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 244773 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 244716 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 244715 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 244666 >seq156 Length=400301 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 71621 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 71564 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 71563 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 71514 >seq41 Length=739040 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 389000 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 388943 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 388942 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 388893 >seq10 Length=22571102 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 17836023 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 17836080 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 17836081 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 17836130 >seq1 Length=17676265 Score = 77.0 bits (84), Expect = 3e-12 Identities = 77/100 (77%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| | | || || ||||||| |||||||||| ||| || | ||| Sbjct 8996187 CAAACCGACACAGATGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAG 8996246 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 ||||| | |||| |||||| |||||||||||| || |||| Sbjct 8996247 GAACTCGACAAAATGACCCCGTAACTTCGGGAGAAGGGGT 8996286 >seq1735 Length=40014 Score = 75.2 bits (82), Expect = 1e-11 Identities = 83/110 (75%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | || |||||||||||| || |||| ||| | || ||| | Sbjct 26268 TAAGGAACTTGGCAAAATAGTCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 26325 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || | || || ||| ||| | |||||||| |||||||||||| || Sbjct 26326 GGGGTTGTAGTGACCAGGCCCAAGTGACTGTTTACCAAAAACACAGGTCT 26375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531011985744