Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq3929 412 6e-113 seq3472 412 6e-113 seq300 412 6e-113 seq4589 403 3e-110 seq3693 322 8e-86 seq2883 233 3e-59 seq1 80.6 5e-13 >seq3929 Length=7564 Score = 412 bits (456), Expect = 6e-113 Identities = 268/293 (91%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || |||||||||||||||||||||||||||||| Sbjct 5366 TACTAGGTTGAATTACTATTGCGAC-ACTTTCATCAGTAGGGTAAAACTAACCTGTCTCA 5308 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 5307 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 5248 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5247 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 5188 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 5187 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 5128 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| ||||||||||||||||||||||| |||||| |||| |||||| Sbjct 5127 CAAATTCCGAAGGACTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 5075 Score = 152 bits (168), Expect = 9e-35 Identities = 110/126 (87%), Gaps = 1/126 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || |||||||||||||||||||||||||||||| Sbjct 5793 TACTAGGTTGAATTACTATTGCGAC-ACTTTCATCAGTAGGGTAAAACTAACCTGTCTCA 5735 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 5734 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGATGA 5675 Query 121 ATTCTG 126 ||| || Sbjct 5674 ATTTTG 5669 >seq3472 Length=10196 Score = 412 bits (456), Expect = 6e-113 Identities = 268/293 (91%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || |||||||||||||||||||||||||||||| Sbjct 522 TACTAGGTTGAATTACTATTGCGAC-ACTTTCATCAGTAGGGTAAAACTAACCTGTCTCA 464 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 463 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 404 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 403 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 344 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 343 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 284 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| ||||||||||||||||||||||| |||||| |||| |||||| Sbjct 283 CAAATTCCGAAGGACTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 231 >seq300 Length=268764 Score = 412 bits (456), Expect = 6e-113 Identities = 268/293 (91%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || |||||||||||||||||||||||||||||| Sbjct 153263 TACTAGGTTGAATTACTATTGCGAC-ACTTTCATCAGTAGGGTAAAACTAACCTGTCTCA 153321 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 153322 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 153381 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 153382 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 153441 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 153442 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 153501 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| ||||||||||||||||||||||| |||||| |||| |||||| Sbjct 153502 CAAATTCCGAAGGACTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 153554 >seq4589 Length=5273 Score = 403 bits (446), Expect = 3e-110 Identities = 223/223 (100%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 73 CCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGG 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGG 60 Query 133 TATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCT 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCT 120 Query 193 GCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGG 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGG 180 Query 253 GACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 223 >seq3693 Length=8861 Score = 322 bits (356), Expect = 8e-86 Identities = 248/293 (85%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | |||||| |||| | | || |||||||||||||||||||||||| ||||| Sbjct 5234 TACTAGGTTGAATTAATATTGTGAC-ACTATCATCAGTAGGGTAAAACTAACCTATCTCA 5292 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 || ||||||||||||||||| |||||||||| ||||||||||||||||| ||| || Sbjct 5293 CGAGGGTCTAAACCCAGCTCAGGTTCCCTATTGATGGGTGAACAATCCAACACTTGGTGA 5352 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 5353 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAACCAACGTTGCTAT 5412 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||| ||||||||||||||||| |||||||| | ||||||||||| | ||||||||| | Sbjct 5413 GAATGCTTGGCTGCCACAAGCTAGTTATCCTTATGGTAACTTTTATAACACCTCTAGTTT 5472 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| | ||| |||||||||||||||||| |||||| || |||||| Sbjct 5473 CAAATTCTAAAGGAAAAAAGGATCGATAGGCCACGCTTTCACTATTCGTATTC 5525 >seq2883 Length=16522 Score = 233 bits (258), Expect = 3e-59 Identities = 147/159 (92%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193 |||||||||||||| |||||| ||||||||||||||||| ||||||||||| |||||||| Sbjct 16042 ATGATAGGAAGAGCTGACATCAAAGGATCAAAAAGCAACTTCGCTATGAACACTTGGCTG 15983 Query 194 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGG 253 | ||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| || Sbjct 15982 CGACAAGCCAGTTATACCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTTCGAAGG 15923 Query 254 ACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 |||||||||||||||||||||||||||| |||| |||| Sbjct 15922 ACTAAAGGATCGATAGGCCACACTTTCACGGTTCATATT 15884 >seq1 Length=17676265 Score = 80.6 bits (88), Expect = 5e-13 Identities = 64/76 (84%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 ||||||| || | ||| | ||||||||| ||||||||||||||||||||| || || | Sbjct 10813979 GAATTACTATAGTGGC-ATTGTCATCAGTTGGGTAAAACTAACCTGTCTCACGATAGTTT 10813921 Query 70 AAACCCAGCTCACGTT 85 ||||||||||||| || Sbjct 10813920 AAACCCAGCTCACATT 10813905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854087836416