Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq36536 107 2e-21 seq615 107 2e-21 seq547 107 2e-21 seq246 107 2e-21 seq156 107 2e-21 seq10 107 2e-21 seq3 98.7 1e-18 seq26616 95.1 1e-17 seq1 80.6 3e-13 >seq36536 Length=153841 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 107080 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 107021 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 || | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 107020 -TCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 106962 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 106961 ACAAGGAATTTCGCTACCTTAGGACCGTTA 106932 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 131215 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 131274 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 || | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 131275 -TCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 131333 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 131334 ACAAGGAATTTCGCTACCTTAGGACCGTTA 131363 >seq615 Length=141330 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 58338 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 58279 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 || | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 58278 -TCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 58220 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 58219 ACAAGGAATTTCGCTACCTTAGGACCGTTA 58190 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 61250 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 61309 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 || | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 61310 -TCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 61368 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 61369 ACAAGGAATTTCGCTACCTTAGGACCGTTA 61398 Score = 98.7 bits (108), Expect = 1e-18 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| ||| || |||| || |||||||||| || | | ||||||| | | Sbjct 16497 GGGTCTTTCTGTCTAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGGG 16556 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 || | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 16557 -TCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 16615 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 16616 ACAAGGAATTTCGCTACCTTAGGACCGTTA 16645 Score = 73.4 bits (80), Expect = 4e-11 Identities = 40/40 (100%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 134 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||||||||||||| Sbjct 32823 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 32862 >seq547 Length=157551 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 64687 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 64628 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 || | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 64627 -TCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 64569 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 64568 ACAAGGAATTTCGCTACCTTAGGACCGTTA 64539 >seq246 Length=308227 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 244393 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 244452 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 || | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 244453 -TCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 244511 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 244512 ACAAGGAATTTCGCTACCTTAGGACCGTTA 244541 >seq156 Length=400301 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 71241 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 71300 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 || | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 71301 -TCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 71359 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 71360 ACAAGGAATTTCGCTACCTTAGGACCGTTA 71389 >seq10 Length=22571102 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 17836403 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 17836344 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 || | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 17836343 -TCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 17836285 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 17836284 ACAAGGAATTTCGCTACCTTAGGACCGTTA 17836255 >seq3 Length=29476785 Score = 98.7 bits (108), Expect = 1e-18 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 9675849 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 9675790 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 || | | ||||||| ||| || ||||||| ||||||| |||||||| Sbjct 9675789 -TCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGACCTTACCCG 9675731 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||| ||||| Sbjct 9675730 ACAAGGAATTTCGCTACCTTAGGATCGTTA 9675701 Score = 93.3 bits (102), Expect = 5e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 9539157 TACGCCTTTCGTGCGGGTCGGACCTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 9539098 Query 173 A 173 | Sbjct 9539097 A 9539097 >seq26616 Length=269 Score = 95.1 bits (104), Expect = 1e-17 Identities = 100/133 (75%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| |||||||| | |||||||||| | | | | ||||||||| Sbjct 138 CGGGGTCTTTCCGTCTAGCCGCGGGTACACCGCATCTTCACGGCGAATTCGATTTCACTG 197 Query 83 AGCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141 || || | | || |||||| || ||||||||||||||||||||||||| Sbjct 198 AG-TCTCTGCTGGAGACAGCGCCCCCATCATTATGCCATTCGTGCAGGTCGGAACTTACC 256 Query 142 CGACAAGGAATTT 154 ||||||||||||| Sbjct 257 CGACAAGGAATTT 269 >seq1 Length=17676265 Score = 80.6 bits (88), Expect = 3e-13 Identities = 106/151 (70%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||| || |||| || |||| || ||||||||| || | | ||||||||| | Sbjct 8996623 CGGGGTATTACCGTCTAGCCGTTGGTACTCTTCATCTTCACGGAGAATTCAATTTCACCG 8996564 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || | ||||||| |||||||| ||||||||||| ||||| | Sbjct 8996563 GGTCCATGTCAGAGACAGGGGGACAGTTGTTACACCATCCGTGCAGGTCGCTACTTATGC 8996504 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||| ||||||||||||||| |||| Sbjct 8996503 AACAAGGAACTTCGCTACCTTAGGATAGTTA 8996473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547006322664