Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq36536 224 2e-56 seq260 224 2e-56 seq88 224 2e-56 seq3776 206 6e-51 seq1 143 6e-32 seq7 87.8 4e-15 >seq36536 Length=153841 Score = 224 bits (248), Expect = 2e-56 Identities = 252/329 (77%), Gaps = 21/329 (6%) Strand=Plus/Minus Query 10 CCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAA 69 ||| || |||||| | | |||||||||||| || |||||||||||||||||| || Sbjct 101484 CCGTAGGCCTTCTACCTC-CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAA 101427 Query 70 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGA 129 |||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||| Sbjct 101426 AATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGA 101367 Query 130 TCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGC 189 |||||||||| |||||| ||| |||| |||||||||| ||| ||| |||||||||||||| Sbjct 101366 TCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGC 101307 Query 190 TAATCCGAC-CTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGT 248 ||||| ||| | || | | || || ||| || ||| |||| | | | Sbjct 101306 TAATCAGACGCGAGCCCCTCCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCT 101260 Query 249 AGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGAT 306 | | || | ||||||||| |||||||| ||| | ||| || ||| || || | Sbjct 101259 CAG-CCTACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGTAGGT 101203 Query 307 TCCTAGGCATTACTCACCCGTCCGCCGCT 335 || || || ||||||||||||||||| || Sbjct 101202 TCTTACGCGTTACTCACCCGTCCGCCACT 101174 Score = 224 bits (248), Expect = 2e-56 Identities = 252/329 (77%), Gaps = 21/329 (6%) Strand=Plus/Plus Query 10 CCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAA 69 ||| || |||||| | | |||||||||||| || |||||||||||||||||| || Sbjct 136811 CCGTAGGCCTTCTACCTC-CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAA 136868 Query 70 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGA 129 |||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||| Sbjct 136869 AATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGA 136928 Query 130 TCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGC 189 |||||||||| |||||| ||| |||| |||||||||| ||| ||| |||||||||||||| Sbjct 136929 TCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGC 136988 Query 190 TAATCCGAC-CTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGT 248 ||||| ||| | || | | || || ||| || ||| |||| | | | Sbjct 136989 TAATCAGACGCGAGCCCCTCCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCT 137035 Query 249 AGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGAT 306 | | || | ||||||||| |||||||| ||| | ||| || ||| || || | Sbjct 137036 CAG-CCTACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGTAGGT 137092 Query 307 TCCTAGGCATTACTCACCCGTCCGCCGCT 335 || || || ||||||||||||||||| || Sbjct 137093 TCTTACGCGTTACTCACCCGTCCGCCACT 137121 >seq260 Length=294823 Score = 224 bits (248), Expect = 2e-56 Identities = 252/329 (77%), Gaps = 21/329 (6%) Strand=Plus/Plus Query 10 CCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAA 69 ||| || |||||| | | |||||||||||| || |||||||||||||||||| || Sbjct 229589 CCGTAGGCCTTCTACCTC-CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAA 229646 Query 70 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGA 129 |||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||| Sbjct 229647 AATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGA 229706 Query 130 TCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGC 189 |||||||||| |||||| ||| |||| |||||||||| ||| ||| |||||||||||||| Sbjct 229707 TCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGC 229766 Query 190 TAATCCGAC-CTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGT 248 ||||| ||| | || | | || || ||| || ||| |||| | | | Sbjct 229767 TAATCAGACGCGAGCCCCTCCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCT 229813 Query 249 AGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGAT 306 | | || | ||||||||| |||||||| ||| | ||| || ||| || || | Sbjct 229814 CAG-CCTACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGTAGGT 229870 Query 307 TCCTAGGCATTACTCACCCGTCCGCCGCT 335 || || || ||||||||||||||||| || Sbjct 229871 TCTTACGCGTTACTCACCCGTCCGCCACT 229899 >seq88 Length=499632 Score = 224 bits (248), Expect = 2e-56 Identities = 252/329 (77%), Gaps = 21/329 (6%) Strand=Plus/Plus Query 10 CCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAA 69 ||| || |||||| | | |||||||||||| || |||||||||||||||||| || Sbjct 290358 CCGTAGGCCTTCTACCTC-CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAA 290415 Query 70 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGA 129 |||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||| Sbjct 290416 AATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGA 290475 Query 130 TCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGC 189 |||||||||| |||||| ||| |||| |||||||||| ||| ||| |||||||||||||| Sbjct 290476 TCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGC 290535 Query 190 TAATCCGAC-CTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGT 248 ||||| ||| | || | | || || ||| || ||| |||| | | | Sbjct 290536 TAATCAGACGCGAGCCCCTCCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCT 290582 Query 249 AGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGAT 306 | | || | ||||||||| |||||||| ||| | ||| || ||| || || | Sbjct 290583 CAG-CCTACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGTAGGT 290639 Query 307 TCCTAGGCATTACTCACCCGTCCGCCGCT 335 || || || ||||||||||||||||| || Sbjct 290640 TCTTACGCGTTACTCACCCGTCCGCCACT 290668 >seq3776 Length=8320 Score = 206 bits (228), Expect = 6e-51 Identities = 180/220 (82%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| |||||| |||| ||||||| ||||||||| Sbjct 3954 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGC 3897 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 ||||||||||| |||||||||||||||| ||||| |||||| || |||||||||||| || Sbjct 3896 CCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCC 3837 Query 119 AGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCT 178 |||||| |||||||||| ||||||| || | ||| | | |||||| |||| |||||| Sbjct 3836 AGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCT 3777 Query 179 CACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGC 218 |||||||| ||||| | || ||||||||| | ||||| Sbjct 3776 GACCAACTACCTAATACTACGCAGGCTCATCAAACAGCGC 3737 >seq1 Length=17676265 Score = 143 bits (158), Expect = 6e-32 Identities = 132/166 (80%), Gaps = 1/166 (1%) Strand=Plus/Minus Query 32 GCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCG 91 ||||||| | || |||||||| || | |||| || ||| |||| |||| ||||| | Sbjct 1031281 GCGGCATAG-CTCTATCAGGCTATCATCTCTTGTGGAAAATTTCCCATTGCTACCTCCTG 1031223 Query 92 TAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACG 151 ||||||||| ||| ||||||||||||||||| ||||||| |||||| || |||||| Sbjct 1031222 TAGGAGTCTAGACTATGTCTCAGTTCCAGTGTAGTTGATCATACTCTCAAACGAGTTACT 1031163 Query 152 GATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGA 197 |||| || | || || ||| ||||||||||||||||| ||||| || Sbjct 1031162 GATCATCACTTTAGTAAGCTATTACCTCACCAACTAGTTAATCAGA 1031117 Score = 138 bits (152), Expect = 2e-30 Identities = 105/124 (85%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 75 CCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 |||||| |||||| ||||||||||||| || ||||| ||| |||||||| |||||||| Sbjct 2369451 CCCACTATTGCCTCTCGTAGGAGTCTGGGCCCTGTCTTAGTCCCAGTGTGGTTGATCATC 2369392 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 194 ||||| || |||||| ||| ||||||||||| ||| ||| ||| ||||||||||||||| Sbjct 2369391 CTCTCGGATCAGTTATTGATTGTCGCCTTGGTAAGCTATTGCCTTACCAACTAGCTAATC 2369332 Query 195 CGAC 198 ||| Sbjct 2369331 AGAC 2369328 >seq7 Length=19579009 Score = 87.8 bits (96), Expect = 4e-15 Identities = 73/87 (84%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 10 CCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAA 69 ||| || |||||| | | |||||||||||| || ||||||||||||||||||| || Sbjct 991788 CCGTAGGCCTTCTACCTC-CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGTGGAA 991845 Query 70 TATTCCCCACTGCTGCCTCCCGTAGGA 96 ||||||||||| |||||||||||||| Sbjct 991846 AATTCCCCACTGTTGCCTCCCGTAGGA 991872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071608334080