Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq3472 118 1e-24 seq2406 118 1e-24 seq4632 116 4e-24 seq3929 116 4e-24 seq2238 116 4e-24 seq950 109 6e-22 seq6024 102 8e-20 seq1597 100 3e-19 >seq3472 Length=10196 Score = 118 bits (130), Expect = 1e-24 Identities = 137/181 (76%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 8410 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 8469 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | | |||| | | | ||||| ||| || | ||| || ||||||| Sbjct 8470 GGGATAACACCACAGGAT-TCTGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGA 8527 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| || |||| |||||||||||||||||||| Sbjct 8528 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 8587 Query 190 T 190 | Sbjct 8588 T 8588 >seq2406 Length=23699 Score = 118 bits (130), Expect = 1e-24 Identities = 137/181 (76%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 3728 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 3669 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | | |||| | | | ||||| ||| || | ||| || ||||||| Sbjct 3668 GGGATAACACCACAGGAT-TCTGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGA 3611 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| || |||| |||||||||||||||||||| Sbjct 3610 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 3551 Query 190 T 190 | Sbjct 3550 T 3550 Score = 109 bits (120), Expect = 6e-22 Identities = 135/181 (75%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | | |||||| |||| |||| | |||||||| ||| Sbjct 1399 CTGTTACTTTGAAGAAATTAGAGTGCTTAAAGCAAGCCTACGCTCTGGATACATTAGCAT 1340 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | | | || | | | ||||| ||| || | | ||| || ||||||| Sbjct 1339 GGGATAACACCACAAGAT-TCTGATCCTATTATGTTGGCCTTTGGGATCGGA-GTAATGA 1282 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| || |||| ||| |||||||||||||||| Sbjct 1281 TTAACAGGGACAGTCGGGGGAATTCGTATTTCATAGTCAGAGGAGAAATTCTTGGATTTA 1222 Query 190 T 190 | Sbjct 1221 T 1221 >seq4632 Length=5156 Score = 116 bits (128), Expect = 4e-24 Identities = 135/178 (76%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||||| Sbjct 4669 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGG 4610 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | | |||| | | | ||||| ||| || | ||| || |||||||| | Sbjct 4609 ATAACACCACAGGAT-TCTGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 4552 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | | ||| ||||||||| | ||||| || |||| ||||||||||||||||||||| Sbjct 4551 ACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 4494 >seq3929 Length=7564 Score = 116 bits (128), Expect = 4e-24 Identities = 135/178 (76%), Gaps = 3/178 (2%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||||| Sbjct 485 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGG 544 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | | |||| | | | ||||| ||| || | ||| || |||||||| | Sbjct 545 ATAACACCACAGGAT-TCTGATCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 602 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | | ||| ||||||||| | ||||| || |||| ||||||||||||||||||||| Sbjct 603 ACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 660 >seq2238 Length=26557 Score = 116 bits (128), Expect = 4e-24 Identities = 141/187 (75%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACAT 63 |||| || |||||||||||||||||||| | |||||| | |||| |||| | |||||| Sbjct 25933 CCAGTGCTGTTACTTTGAAAAAATTAGAGTGCTCAAAGTAAGCCTACGCTCTGGATACAT 25992 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG 123 || ||||| |||| | | |||| | | | ||||| ||| || | |||| || | Sbjct 25993 TAGCATGGGATAACACCACAGGA-TTCTGATCCTATTGTGTTGGCCTTCAGGATCG-GAG 26050 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||||| || | ||||||||| || || ||||| || |||| || ||||||||||| Sbjct 26051 TAATGATTAACAGGGATAGTCGAGGCATTC-GTATTTCATAGTCACAGATGAAATTCTTG 26109 Query 184 GATTTAT 190 ||||||| Sbjct 26110 GATTTAT 26116 >seq950 Length=86707 Score = 109 bits (120), Expect = 6e-22 Identities = 140/188 (74%), Gaps = 5/188 (3%) Strand=Plus/Plus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACAT 63 |||| || |||||||||| ||||||||| | |||||||| |||| || | |||||| Sbjct 22808 CCAGTGCTGTTACTTTGAACAAATTAGAGTGCTCAAAGCAAGCCTACACTTTGGATACAT 22867 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCT-ATTTTGTAGGTTTCTAGGACCGCCC 122 || ||||| |||| | | |||| | | | ||| ||| ||| || | |||| | Sbjct 22868 TAGCATGGGATAAAATCACAGGA--TTCTGATCTTATTGTGTTGGCCTTCAGGATCAGA- 22924 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| || | ||| ||||||||| | ||||| || ||||||||| |||||||| Sbjct 22925 GTAATGATTAACAAGGACAGTCGGGGGCATTCGTATTTCATAGTCAAAGGTAAAATTCTT 22984 Query 183 GGATTTAT 190 |||||||| Sbjct 22985 GGATTTAT 22992 Score = 109 bits (120), Expect = 6e-22 Identities = 140/188 (74%), Gaps = 5/188 (3%) Strand=Plus/Plus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACAT 63 |||| || |||||||||| ||||||||| | |||||||| |||| || | |||||| Sbjct 46065 CCAGTGCTGTTACTTTGAACAAATTAGAGTGCTCAAAGCAAGCCTACACTTTGGATACAT 46124 Query 64 TACCATGGAATAATAGAATAGGACGTGCGGTTCT-ATTTTGTAGGTTTCTAGGACCGCCC 122 || ||||| |||| | | |||| | | | ||| ||| ||| || | |||| | Sbjct 46125 TAGCATGGGATAAAATCACAGGA--TTCTGATCTTATTGTGTTGGCCTTCAGGATCAGA- 46181 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| || | ||| ||||||||| | ||||| || ||||||||| |||||||| Sbjct 46182 GTAATGATTAACAAGGACAGTCGGGGGCATTCGTATTTCATAGTCAAAGGTAAAATTCTT 46241 Query 183 GGATTTAT 190 |||||||| Sbjct 46242 GGATTTAT 46249 >seq6024 Length=2579 Score = 102 bits (112), Expect = 8e-20 Identities = 133/179 (74%), Gaps = 5/179 (3%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 |||||||||| ||||||||| | |||||||| || | |||| | ||||||| ||||| Sbjct 2055 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCATACGCTCTGGGTACATTAACATGGG 1996 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGT-TTCTAGGACCGCCCGTAATGATA 131 |||| | | |||| | ||| ||||| ||| || ||| || | | |||||||| Sbjct 1995 ATAACACCACAGGAT-TCTGGTCCTATTGTGTTGGCCTTCGAGATCGGA--GTAATGATT 1939 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 || | ||| |||| |||| | ||||| || || | ||||||||||||||||||||| Sbjct 1938 AACAGGGACAGTCAGGGGCATTCGTATTGCATAGTTAGAGGTGAAATTCTTGGATTTAT 1880 >seq1597 Length=45033 Score = 100 bits (110), Expect = 3e-19 Identities = 133/181 (73%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||| ||| | |||||||| |||| |||| | ||||||| || Sbjct 14317 CTGTTACTTTGAAGAAATTTGAGTGCTCAAAGCAAGCCTACGCTCTGGGTACATTAGCAG 14258 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | | | || | ||| ||||| ||| || | ||| || ||||||| Sbjct 14257 GGGATAACACCACAAGAT-TCTGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGA 14200 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| || || | |||||||||||||||||||| Sbjct 14199 TTAACAGGGACAGTCGGGGGCATTCGTATTGCATAGTGAGAGGTGAAATTCTTGGATTTA 14140 Query 190 T 190 | Sbjct 14139 T 14139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511818781440