Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq36536 262 6e-68 seq615 262 6e-68 seq547 262 6e-68 seq246 262 6e-68 seq10 262 6e-68 seq156 232 1e-58 seq1 145 1e-32 seq7 140 5e-31 seq185 120 5e-25 seq32265 82.4 1e-13 >seq36536 Length=153841 Score = 262 bits (290), Expect = 6e-68 Identities = 215/260 (83%), Gaps = 1/260 (0%) Strand=Plus/Minus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCA 75 ||||||||| |||||| |||||| ||| |||| ||| |||||| | | | | |||| Sbjct 107778 CTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCA 107719 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 | |||||| |||||||||| |||| ||||||||||||||||||| ||| || |||| Sbjct 107718 CGATAACTGGCACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCT 107659 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 ||||| || |||||||| |||||| ||||||||||||||| ||||||||||||||| Sbjct 107658 CTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCC 107599 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 ||||| ||| || ||||||||||||||||||||||||||||| || |||| ||||||||| Sbjct 107598 AGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAG 107539 Query 256 GATGAGACGAGCCGACATCG 275 | | || |||||||||||| Sbjct 107538 GTGGCGAAGAGCCGACATCG 107519 Score = 262 bits (290), Expect = 6e-68 Identities = 215/260 (83%), Gaps = 1/260 (0%) Strand=Plus/Plus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCA 75 ||||||||| |||||| |||||| ||| |||| ||| |||||| | | | | |||| Sbjct 130517 CTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCA 130576 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 | |||||| |||||||||| |||| ||||||||||||||||||| ||| || |||| Sbjct 130577 CGATAACTGGCACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCT 130636 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 ||||| || |||||||| |||||| ||||||||||||||| ||||||||||||||| Sbjct 130637 CTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCC 130696 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 ||||| ||| || ||||||||||||||||||||||||||||| || |||| ||||||||| Sbjct 130697 AGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAG 130756 Query 256 GATGAGACGAGCCGACATCG 275 | | || |||||||||||| Sbjct 130757 GTGGCGAAGAGCCGACATCG 130776 >seq615 Length=141330 Score = 262 bits (290), Expect = 6e-68 Identities = 215/260 (83%), Gaps = 1/260 (0%) Strand=Plus/Minus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCA 75 ||||||||| |||||| |||||| ||| |||| ||| |||||| | | | | |||| Sbjct 59036 CTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCA 58977 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 | |||||| |||||||||| |||| ||||||||||||||||||| ||| || |||| Sbjct 58976 CGATAACTGGCACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCT 58917 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 ||||| || |||||||| |||||| ||||||||||||||| ||||||||||||||| Sbjct 58916 CTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCC 58857 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 ||||| ||| || ||||||||||||||||||||||||||||| || |||| ||||||||| Sbjct 58856 AGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAG 58797 Query 256 GATGAGACGAGCCGACATCG 275 | | || |||||||||||| Sbjct 58796 GTGGCGAAGAGCCGACATCG 58777 Score = 262 bits (290), Expect = 6e-68 Identities = 215/260 (83%), Gaps = 1/260 (0%) Strand=Plus/Plus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCA 75 ||||||||| |||||| |||||| ||| |||| ||| |||||| | | | | |||| Sbjct 60552 CTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCA 60611 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 | |||||| |||||||||| |||| ||||||||||||||||||| ||| || |||| Sbjct 60612 CGATAACTGGCACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCT 60671 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 ||||| || |||||||| |||||| ||||||||||||||| ||||||||||||||| Sbjct 60672 CTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCC 60731 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 ||||| ||| || ||||||||||||||||||||||||||||| || |||| ||||||||| Sbjct 60732 AGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAG 60791 Query 256 GATGAGACGAGCCGACATCG 275 | | || |||||||||||| Sbjct 60792 GTGGCGAAGAGCCGACATCG 60811 >seq547 Length=157551 Score = 262 bits (290), Expect = 6e-68 Identities = 215/260 (83%), Gaps = 1/260 (0%) Strand=Plus/Minus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCA 75 ||||||||| |||||| |||||| ||| |||| ||| |||||| | | | | |||| Sbjct 65385 CTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCA 65326 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 | |||||| |||||||||| |||| ||||||||||||||||||| ||| || |||| Sbjct 65325 CGATAACTGGCACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCT 65266 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 ||||| || |||||||| |||||| ||||||||||||||| ||||||||||||||| Sbjct 65265 CTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCC 65206 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 ||||| ||| || ||||||||||||||||||||||||||||| || |||| ||||||||| Sbjct 65205 AGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAG 65146 Query 256 GATGAGACGAGCCGACATCG 275 | | || |||||||||||| Sbjct 65145 GTGGCGAAGAGCCGACATCG 65126 >seq246 Length=308227 Score = 262 bits (290), Expect = 6e-68 Identities = 215/260 (83%), Gaps = 1/260 (0%) Strand=Plus/Plus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCA 75 ||||||||| |||||| |||||| ||| |||| ||| |||||| | | | | |||| Sbjct 243695 CTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCA 243754 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 | |||||| |||||||||| |||| ||||||||||||||||||| ||| || |||| Sbjct 243755 CGATAACTGGCACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCT 243814 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 ||||| || |||||||| |||||| ||||||||||||||| ||||||||||||||| Sbjct 243815 CTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCC 243874 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 ||||| ||| || ||||||||||||||||||||||||||||| || |||| ||||||||| Sbjct 243875 AGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAG 243934 Query 256 GATGAGACGAGCCGACATCG 275 | | || |||||||||||| Sbjct 243935 GTGGCGAAGAGCCGACATCG 243954 >seq10 Length=22571102 Score = 262 bits (290), Expect = 6e-68 Identities = 215/260 (83%), Gaps = 1/260 (0%) Strand=Plus/Minus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCA 75 ||||||||| |||||| |||||| ||| |||| ||| |||||| | | | | |||| Sbjct 17837101 CTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTACCGTGGGCA 17837042 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 | |||||| |||||||||| |||| ||||||||||||||||||| ||| || |||| Sbjct 17837041 CGATAACTGGCACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCT 17836982 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 ||||| || |||||||| |||||| ||||||||||||||| ||||||||||||||| Sbjct 17836981 CTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCC 17836922 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 ||||| ||| || ||||||||||||||||||||||||||||| || |||| ||||||||| Sbjct 17836921 AGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAG 17836862 Query 256 GATGAGACGAGCCGACATCG 275 | | || |||||||||||| Sbjct 17836861 GTGGCGAAGAGCCGACATCG 17836842 Score = 105 bits (116), Expect = 1e-20 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 88 CACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT 147 |||||||| | ||||| |||| |||||| |||||| | | | ||||||| | || Sbjct 1292324 CACCAGAGTTGTGTCCTTCCCTATCCTCTTGTACTAGGAAAAAGTCCTCTCTATGCTCTA 1292383 Query 148 ACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCC 207 || ||||| |||| ||||| || |||||| || ||| |||| | ||||| | | | Sbjct 1292384 ACACCCACACTAGATATGGACCAAATTGTCTCCTGAAGTTTTGAATCTAGCTCACTTACT 1292443 Query 208 TCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACT 245 |||||||||| ||||| |||||||||||| || |||| Sbjct 1292444 GCTTTAATGGGTGAACAACCCAACCCTTGGAACATACT 1292481 >seq156 Length=400301 Score = 232 bits (256), Expect = 1e-58 Identities = 169/196 (86%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 80 AACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCA 139 |||||| |||||||||| |||| ||||||||||||||||||| ||| || |||||||| Sbjct 70607 AACTGGCACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCA 70666 Query 140 AATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCT 199 | || |||||||| |||||| ||||||||||||||| ||||||||||||||||||| Sbjct 70667 ATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCT 70726 Query 200 CGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATG 259 | ||| || ||||||||||||||||||||||||||||| || |||| |||||||||| | Sbjct 70727 CACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAGGTGG 70786 Query 260 AGACGAGCCGACATCG 275 || |||||||||||| Sbjct 70787 CGAAGAGCCGACATCG 70802 >seq1 Length=17676265 Score = 145 bits (160), Expect = 1e-32 Identities = 157/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 72 GGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGC 131 |||| ||||| || ||||| ||||| | ||| || |||||||||||||| || || Sbjct 8997248 GGCAAAACAACCAGTACACCATAGGTTGGCCCAACCTAGTCCTCTCGTACTAGGGTTGGC 8997189 Query 132 TCCTCTCAAATTTCCT----ACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTT 187 ||||| || | ||| || || || |||||| ||||||||||||| ||| ||| Sbjct 8997188 TCCTCGCAGTTCTCCCTTTAACACCAACAGTAGATAGGAACCGAACTGTCTCACGATGTT 8997129 Query 188 CTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTC 247 || |||||| ||| | | || ||| ||| | |||||| || |||||||||||||| |||| Sbjct 8997128 CTAAACCCAACTCACATACCACTTGAATCGACGAACAACCGAACCCTTGGGACCTTCTTC 8997069 Query 248 AGCCCCAGGATGAGACGAGCCGACATCG 275 | | |||||||| || ||| ||||||| Sbjct 8997068 AACTCCAGGATGTGATGAGTTGACATCG 8997041 >seq7 Length=19579009 Score = 140 bits (154), Expect = 5e-31 Identities = 202/291 (69%), Gaps = 33/291 (11%) Strand=Plus/Plus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCA 75 ||||||||| |||||| |||||| ||| |||| ||| || ||| | | | |||| Sbjct 4013983 CTTAGATGCTTTCAGCAGTTATCCGCTCCCCACTTGGCTACCTAGCATTTATTGTGGGCA 4014042 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 | |||| | ||||| |||| ||| ||| |||||||||||||||||| || |||| Sbjct 4014043 AGATAACTAGCACACCAAAGGTGCATCCTTCCTAGTCCTCTCGTACTAAGGAAAGGTCCT 4014102 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 ||||| || || |||||| |||||| |||||||| |||||| ||| ||||||||||| Sbjct 4014103 CTCAATGCTC-TAAGCCCACACCGGATATGGACCGAATTGTCTCACGATGTTCTGAACCC 4014161 Query 196 AG-------------------------------CTCGCGTGCCTCTTTAATGGGCGAACA 224 || ||| ||| || ||||||||| |||||| Sbjct 4014162 AGACCGAATTGTCTCACGATGTTCTGAACCCAACTCACGTACCACTTTAATGGACGAACA 4014221 Query 225 GCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||||||| | || |||| || ||||||| | || ||||| |||||| Sbjct 4014222 ACCCAACCCTTAGAACATACTACAACCCCAGGTAGCGAAGAGCCAACATCG 4014272 >seq185 Length=364255 Score = 120 bits (132), Expect = 5e-25 Identities = 141/189 (75%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 89 ACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGAC---AGCTCCTCTCAAATTTC 145 |||| || | ||||| ||| |||||||| ||||| ||| || |||| |||| | || Sbjct 68990 ACCATAGATGTGTCCTTCCTTGTCCTCTCATACTAGGGAATAAAGGTCCTTTCAATTCTC 68931 Query 146 CTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTG 205 || ||||| || ||| ||| | |||| |||| ||||||| |||||| ||||| || Sbjct 68930 TAACACCCACATCGAATATGGATCAAACTATCTCACGACGTTTTGAACCTAGCTCATGTA 68871 Query 206 CCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGA 265 | ||||||||| ||||| ||||||||||| || |||| || || |||| | || | Sbjct 68870 CTGCTTTAATGGT-GAACAACCCAACCCTTGAAACATACTACAACCTCAGGTGGCGAAAA 68812 Query 266 GCCGACATC 274 ||||||||| Sbjct 68811 GCCGACATC 68803 >seq32265 Length=224 Score = 82.4 bits (90), Expect = 1e-13 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 3 AGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC 62 ||| | | ||| |||||||||| |||||| ||||| ||||| ||||||||| ||| || Sbjct 100 AGGCGAGTTTCCCGCTTAGATGCTTTCAGCGGTTATCTCTTCCGAACTTAGCTACCCGGC 41 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTC 102 |||| |||| ||||| ||| ||||||||||| ||| Sbjct 40 AATGCCACTGGCGTGACAACCGGTACACCAGAGGTTCGTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780523641696