Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq36536 318 2e-84 seq88 318 2e-84 seq3776 269 8e-70 seq260 223 1e-55 seq7 178 4e-42 seq1 138 3e-30 seq266 87.8 5e-15 seq9 75.2 3e-11 >seq36536 Length=153841 Score = 318 bits (352), Expect = 2e-84 Identities = 277/342 (81%), Gaps = 3/342 (1%) Strand=Plus/Plus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | Sbjct 101295 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 101354 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||| Sbjct 101355 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 101414 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || | |||||||| ||||||||| | ||||| |||||||| | || Sbjct 101415 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGA 101474 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397 |||||| |||||| | || ||| | | | ||||| |||||||||| | ||| Sbjct 101475 AGGCCTACGGGTCATGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCCGGGGAAT 101534 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||| Sbjct 101535 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 101594 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 |||| | | |||||||||| || |||||||| || |||||| Sbjct 101595 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGT 101635 Score = 318 bits (352), Expect = 2e-84 Identities = 277/342 (81%), Gaps = 3/342 (1%) Strand=Plus/Minus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | Sbjct 137000 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 136941 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||| Sbjct 136940 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 136881 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || | |||||||| ||||||||| | ||||| |||||||| | || Sbjct 136880 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGA 136821 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397 |||||| |||||| | || ||| | | | ||||| |||||||||| | ||| Sbjct 136820 AGGCCTACGGGTCATGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCCGGGGAAT 136761 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||| Sbjct 136760 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 136701 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 |||| | | |||||||||| || |||||||| || |||||| Sbjct 136700 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGT 136660 >seq88 Length=499632 Score = 318 bits (352), Expect = 2e-84 Identities = 277/342 (81%), Gaps = 3/342 (1%) Strand=Plus/Minus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | Sbjct 290547 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 290488 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||| Sbjct 290487 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 290428 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || | |||||||| ||||||||| | ||||| |||||||| | || Sbjct 290427 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGA 290368 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397 |||||| |||||| | || ||| | | | ||||| |||||||||| | ||| Sbjct 290367 AGGCCTACGGGTCATGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCCGGGGAAT 290308 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||| Sbjct 290307 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 290248 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 |||| | | |||||||||| || |||||||| || |||||| Sbjct 290247 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGT 290207 >seq3776 Length=8320 Score = 269 bits (298), Expect = 8e-70 Identities = 258/327 (79%), Gaps = 5/327 (2%) Strand=Plus/Plus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 ||||| |||||||| |||||| |||| |||||| | | ||| |||| | || || Sbjct 3762 ATTAGGTAGTTGGTCAGGTAAAGGCTGACCAAGCCAATGATGCTTAGCTGGTCTTTTCGG 3821 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287 ||||| |||||| ||| |||||||||||| || ||||| ||||| ||||||||||||| Sbjct 3822 ATGATCAGCCACACTGGGACTGAGACACGGCCCGGACTCCCACGGGGGGCAGCAGTGGGG 3881 Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCC--T 345 ||| ||| ||||||||| |||||| ||| |||||| |||||||| || ||||| | | Sbjct 3882 AATCTTGGACAATGGGCGAAAGCCCGATCCAGCAATATCGCGTGAGTGAAGAAGGGCAAT 3941 Query 346 TCGGGTCGTAAAGCTCTGTCCTCAA--GGAAGATAATGACGGTACTTGAGGAGGAAGCCC 403 | | | |||||||||| || || | | ||| ||||| | ||| ||||| ||||||| Sbjct 3942 GCCGCTTGTAAAGCTCTTTCGTCGAGTGCGCGATCATGACAGGACTCGAGGAAGAAGCCC 4001 Query 404 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 463 ||||||||| |||||||||||||||||||| ||| |||||| || ||| | |||||| | Sbjct 4002 CGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTGTTCTTCGGAATGA 4061 Query 464 CTGGGGCGTAAAGGGTGCGTAGGTGGT 490 || |||||||||||| |||||| ||| Sbjct 4062 CT-GGGCGTAAAGGGCACGTAGGCGGT 4087 >seq260 Length=294823 Score = 223 bits (246), Expect = 1e-55 Identities = 165/193 (85%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | Sbjct 229778 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 229719 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||| Sbjct 229718 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 229659 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || | |||||||| ||||||||| | ||||| |||||||| | || Sbjct 229658 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGA 229599 Query 340 AGGCCTTCGGGTC 352 |||||| |||||| Sbjct 229598 AGGCCTACGGGTC 229586 >seq7 Length=19579009 Score = 178 bits (196), Expect = 4e-42 Identities = 183/237 (77%), Gaps = 3/237 (1%) Strand=Plus/Minus Query 265 TCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACG 324 |||||||||||||| ||||||||||| || |||||||||| ||||||||| | ||||| | Sbjct 991872 TCCTACGGGAGGCAACAGTGGGGAATTTTCCACAATGGGCGAAAGCCTGACGGAGCAATG 991813 Query 325 CCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGA 382 ||||||| | |||||||| |||||| | || | | | ||| ||||| ||||| Sbjct 991812 CCGCGTGGAGGTAGAAGGCCTACGGGTCATGAACTTTTTTTCTCGGAGAAGAAGCAATGA 991753 Query 383 CGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGG 442 ||||| | ||| |||| ||||||||| ||||||||| |||||||| || ||| Sbjct 991752 CGGTATCCGGGGAATAAGCATCGGCTAACTCTATGCCAGCAGTCGCGGTAAGACAGAGGA 991693 Query 443 GGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 || || |||||| ||||| | | |||||||||| || |||||||| || |||||| Sbjct 991692 TGCAAGTGTTATCTGGAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGT 991637 >seq1 Length=17676265 Score = 138 bits (152), Expect = 3e-30 Identities = 114/139 (82%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||||||| || ||||||||||||||| |||| || | || Sbjct 2369325 CGCGTCTGATTAGCTAGTTGGTAAGGCAATAGCTTACCAAGGCGACAATCAATAACTGAT 2369384 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| ||||| ||| ||| ||||| || ||| ||||||||| |||||| Sbjct 2369385 CCGAGAGGATGATCAACCACACTGGGACTAAGACAGGGCCCAGACTCCTACGAGAGGCAA 2369444 Query 280 CAGTGGGGAATATTGCACA 298 |||||| | | || |||| Sbjct 2369445 TAGTGGGAATTTTTCCACA 2369463 Score = 118 bits (130), Expect = 3e-24 Identities = 125/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 164 TCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGA 223 |||||||| ||||||||| |||||| |||||| || | || |||||||| | ||| Sbjct 1031117 TCTGATTAACTAGTTGGTGAGGTAATAGCTTACTAAAGTGATGATCAGTAACTCGTTTGA 1031176 Query 224 GAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGT 283 ||| ||||| | ||| ||||||||||||| ||| | |||||||| ||||| |||| | Sbjct 1031177 GAGTATGATCAACTACACTGGAACTGAGACATAGTCTAGACTCCTACAGGAGGTAGCAAT 1031236 Query 284 GGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGC 328 ||| ||| || ||||| | | |||||||| ||| | ||||| Sbjct 1031237 GGGAAATTTTCCACAAGAGATGATAGCCTGATAGAGCTATGCCGC 1031281 >seq266 Length=289211 Score = 87.8 bits (96), Expect = 5e-15 Identities = 71/85 (84%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 415 GTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAA 474 ||||||||||||||||||| || ||| || ||||||||||||||| | | |||||||| Sbjct 61271 GTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCGGAATGA-TTGGGCGTAA 61329 Query 475 AGGGTGCGTAGGTGGTTTCTTAAGT 499 || || |||||||| || |||||| Sbjct 61330 AGCGTCTGTAGGTGGCTTTTTAAGT 61354 >seq9 Length=10489139 Score = 75.2 bits (82), Expect = 3e-11 Identities = 112/157 (71%), Gaps = 8/157 (5%) Strand=Plus/Minus Query 348 GGGTCGTAAAGCTCTGTCCTCAAGGAAGA------TAATGACGGTACTTGAGGAGGAAGC 401 ||||| | || ||| | |||| ||||| ||||||||||| || | || || Sbjct 2557095 GGGTCATGAATTTCTTTTCTCAGAGAAGAAGCAATTAATGACGGTATCTGGGAAGTAAAT 2557036 Query 402 CCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAAT 461 |||||| || ||||||||| | |||||| | | ||| || ||||||||||||||| Sbjct 2557035 ATCGGCTAGCTCTGTGCCAGCAATCACGGTAAGATGGAGGATGCAAGCGTTATCCGGAAT 2556976 Query 462 TACTGGGGCGTAAAGGGTGCGTAGGTG-GTTTCTTAA 497 | | ||||||||| || ||||||| ||| |||| Sbjct 2556975 GA-TTAGGCGTAAAGCGTCTGTAGGTGACTTTTTTAA 2556940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497052836864