Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2 170 2e-37 >seq2 Length=36921656 Score = 170 bits (188), Expect = 2e-37 Identities = 577/881 (65%), Gaps = 32/881 (4%) Strand=Plus/Plus Query 61064 TGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCT 61123 ||||||| ||| |||| | || ||| |||||||| || || ||||| || |||| Sbjct 1442200 TGTTCCCAATCCAGTACCCCCAAATCTGGGAAATGTACAAGAAAGCCGAAGCCTCTTTCT 1442259 Query 61124 GGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG-CGTTTATCGAGC 61182 |||||| |||||||||||| | || | ||| | ||||||| | | | ||| | Sbjct 1442260 GGACGGCGGAGGAGGTCGACCTCTCGCAGGACCTCCGCCACTGGGACTCCCTCACCGA-C 1442318 Query 61183 GGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTC 61242 || |||| || ||| | | || || | || ||||||||||| || ||||| |||||| Sbjct 1442319 GGCGAACGCCACTTCGTCACCCACGTCCTCGCCTTCTTTGCCGCCTCCGACGGCATCGTC 1442378 Query 61243 AATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTC 61302 |||||| | | || ||| | ||||| | ||||| | ||||| || ||| Sbjct 1442379 CTCGAGAATCTCGCCGGCCGCTTCATGAAGGAGATCCAAGTCGCCGAGGCTCGCGCCTTC 1442438 Query 61303 TACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGAT 61362 ||||||||||| || ||||| ||||| ||||||| ||||||||||| | ||| |||| Sbjct 1442439 TACGGCTTCCAAATCGCCATCGAGAACATCCACTCCGAGATGTACAGCCTCCTCCTCGAA 1442498 Query 61363 ACGTACATC-AGGGAGCGGGCG-GAACGTGAACGA-TTGTTCAATGCCATCGAGACGAT- 61418 || |||||| || | | | || ||| | || | | ||| | |||||||| || || Sbjct 1442499 ACCTACATCAAGAGCTCCGACGAGAA---GCACCACCTCTTCCACGCCATCGAAACCATC 1442555 Query 61419 ACCGGCGGTG--AAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCT 61476 || ||| || || ||| || | |||||| | ||||| | | | | || || Sbjct 1442556 CCCTGCGTTGCCAA---GAAGGCCCAATGGGCCCTGCGCTGGAT--CGACTCCTCCGACT 1442610 Query 61477 ACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCG 61536 | || | ||| || | | || || || |||||||| | || ||| |||| Sbjct 1442611 -CCTTCGCTGAGCGCATCGTCGCCTTCGCCTGCGTCGAGGGAATCTTCTTCTCTGGAAGC 1442669 Query 61537 TTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAAT 61596 || | | || || ||| | ||||| || || | ||||| || || || ||| ||| Sbjct 1442670 TTCTGCTCCATTTTCTGGCTCAAGAAGCGCGGCTTGATGCCTGGCCTCACTTTCTCCAAC 1442729 Query 61597 GAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGC 61656 || | || || ||||||||||| | || || || || || | || || | | Sbjct 1442730 GAACTCATTTCCCGCGACGAGGGGCTTCACTGCGACTTCGC---CTGCCTCTTGTA---C 1442783 Query 61657 TATCTGGTGA-----ATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGG 61711 | |||| ||| | || | |||||||| ||| ||||| || | || || | Sbjct 1442784 TCTCTGCTGAGGAAGAAGCTCAG--CGAGGAGCGCGTGAAGGAGATCGTGAGGGACGCTG 1442841 Query 61712 TAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATT 61771 | |||||| ||| ||| || ||||| | || | | | | || |||||| Sbjct 1442842 TGGATATCGAGAGGGAGTTTGTGTGCGACGCGCTTCCGTGCGCGTTGCTGGGGATGAATG 1442901 Query 61772 GTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCG-ATTTGGGT 61830 | | | ||| ||||| ||||| ||||| || || ||| ||||||| | |||| | Sbjct 1442902 GGGAGTTGATGGGTCAGTACATTGAGTTTGTGGCGGATCGTTTGTTGGTTGCGCTTGGCT 1442961 Query 61831 ATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGAT 61890 | | | | || ||| | ||||| ||||| | ||||| |||||||| || | Sbjct 1442962 GCG-GGAAGGTGTACAATGTTCAGAACCCTTTTGACTGGATGGAGCTGATTTCGTTGCAG 1443020 Query 61891 GGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 || ||||| ||||| || ||||| || || || || ||||| Sbjct 1443021 GGGAAGACCAATTTCTTTGAGAAGCGCGTGGGGGAGTATCA 1443061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397390969927040