Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cajanus_20cajan_20[refseq_20GCF_5F000340665.1_202016-09-29] 36,536 sequences; 592,970,700 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq15859 161 3e-35 seq10042 129 2e-25 >seq15859 Length=472 Score = 161 bits (178), Expect = 3e-35 Identities = 136/167 (81%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 2746 GCGAAAGAAGCTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCA 2805 ||||||||| ||| || | ||||| | ||||||||||| || |||||||||||||| Sbjct 467 GCGAAAGAAAATGGTTATTCTACAGTAATTTCACACCGTTCTGGCGAAACTGAAGATTCT 408 Query 2806 ACAATCGCTGATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCA 2865 || || || ||| |||| || | ||| |||||||||||||||||||||||| ||| Sbjct 407 ACGATTGCGGATCTTGCGGTGGGTACTGCAGCTGGTCAAATTAAGACAGGTTCACTGTGC 348 Query 2866 CGTACTGACCGTATTGCTAAATACAACCAATTGCTTCGTATCGAAGA 2912 ||| |||||||| | || ||||||||||||||||||||||| ||||| Sbjct 347 CGTTCTGACCGTGTAGCGAAATACAACCAATTGCTTCGTATTGAAGA 301 >seq10042 Length=872 Score = 129 bits (142), Expect = 2e-25 Identities = 411/624 (66%), Gaps = 29/624 (5%) Strand=Plus/Plus Query 1693 GCACGTGAAGTCCTTGACTCACGCGGTAACCCAACACTTGAAGTAGAAGTTTACACTGAA 1752 ||||||||| | | ||||| || ||||||||||| | |||| ||| || | | | Sbjct 120 GCACGTGAAATTTTGGACTCTCGTGGTAACCCAACCATCGAAGCAGACGTAATCTTAGCA 179 Query 1753 TCTGGTGCATTCGGTCGCGGTATG-GTTCCTTCAGGAGCATCAACTGGTGAACACGAAGC 1811 ||||| | | | || || | ||| | || || || || ||||||||| | ||||| Sbjct 180 TCTGGCGTAGTTGGCCGTGC-ATGTGCACCATCTGGTGCTTCAACTGGTTCTCGTGAAGC 238 Query 1812 AGTAGAACTTCGTGATGGTGACAAAGCTCGTTACGGTGGTCTTGGTACTCAAAAAGCAGT 1871 |||||||||||||||| |||||||| || || ||| ||| | ||| || || Sbjct 239 TTTAGAACTTCGTGATGGCGACAAAGCACGCTATTTAGGTAAAGGTGTTAAAACTGCGGT 298 Query 1872 TGATAACGTAAACAACGTTATTGCTGAGCACATCATCGGATTCGAC-GTACGTGATCAAC 1930 | | |||||||||| |||| ||| | | | || | | ||| ||| ||| Sbjct 299 TAACAACGTAAACACGATTATCCGTGATG-CTTTAGTGGGTAAATCAGTATTTGAACAAA 357 Query 1931 AAGGTATTGACCGCGCAATGATCGCTCTTGACGGTACTCCAAACAAAGGTAAACTTGGTG 1990 ||| || || | | ||||||| ||||| |||||| |||||||| ||| | |||| Sbjct 358 AAGACATCGATAACACGATGATCGAACTTGATGGTACTGAAAACAAAGAAAAATTGGGTG 417 Query 1991 CCAACGCTATTCTTGGTGTGTCTATCGCTGTAGCACGCGCAGCTGCTGACTACCTTGAAG 2050 | || || | | | | || || | |||| ||||| || ||||| || | || Sbjct 418 CGAATGCAACTTTAGCGGTATCACTAGCTGCTGCACGTGCTGCTGCCGATGAAAAGAAAA 477 Query 2051 TTCCACTTT------ACA--GCTACCTTGGCGGATTCAACACTAAAGT---TCTTCCAAC 2099 |||| |||| ||| || ||| || |||| |||| | | | || Sbjct 478 TTCCTCTTTTTCAATACATCGCAGACTTA-CGTGGTCAA-ACTATTTTGACTATGCCTGT 535 Query 2100 TCCAATGATGAACATCATCAACGGTGGTTCTCACTCAGACGCTCCAA--TCGCTTTCCAA 2157 |||||||||||||||||||| |||||||| || |||| | ||| | | | | ||| Sbjct 536 ACCAATGATGAACATCATCAATGGTGGTTCGCATGCAGA--CAACAACGTTGATATTCAA 593 Query 2158 GAATTTATGATTGTACCTGCTGGTGCACCAACATTCAAAGAAGCGCTTCGTTGGGGTGCT 2217 || || ||||| | |||| ||| | ||||| ||||| | ||| ||||||| Sbjct 594 GAGTTCATGATCGAGCCTGTAGGTTTCACTTCATTCTCTGAAGCATTACGTGCGGGTGCT 653 Query 2218 GAAATCTTCCACGCGCTTAAGAAAATC---CTTAAAGAACGTGGACTTGAA-ACAGCCGT 2273 ||||||||||| | || |||||| ||||| || | || || || || || Sbjct 654 GAAATCTTCCATTCTCT----AAAATCAGTTTTAAACAAAAAAGGTTTAAACACTGCTGT 709 Query 2274 AGGTGACGAAGGTGGTTTCGCACC 2297 |||||| ||||||||||| || || Sbjct 710 AGGTGATGAAGGTGGTTTTGCGCC 733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155970700399584