Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Camelina_20sativa_20[refseq_20GCF_5F000633955.1_202014-04-24] 37,212 sequences; 641,356,059 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq27608 84.2 5e-14 >seq27608 Length=235 Score = 84.2 bits (92), Expect = 5e-14 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 171 ACCGCCTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGG 230 ||| | ||||| || ||||| | ||| | |||||||| |||||| || || || |||||| Sbjct 101 ACCACTTTGCGACAAATCTTGGAGATTTCGCGCTCCATGCCACGAACGCCCGCCTCGCGG 160 Query 231 GTGTAGTAGCGGACGATGTCGCGGAT 256 ||||||||||| | ||||||||| || Sbjct 161 GTGTAGTAGCGAATGATGTCGCGAAT 186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1157968936192