Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cannabis_20sativa_20[genbank_20GCA_5F001865755.1_202016-11-03]
11,110 sequences; 585,823,666 total letters
Query= AAMG01001821.1
Length=161
Score E
Sequences producing significant alignments: (Bits) Value
seq8897 123 2e-26
seq10380 122 7e-26
seq9588 122 7e-26
seq9473 122 7e-26
seq9286 122 7e-26
seq9098 122 7e-26
seq8966 122 7e-26
seq8747 122 7e-26
seq8432 122 7e-26
seq8215 122 7e-26
seq7826 122 7e-26
seq7819 122 7e-26
seq6540 122 7e-26
seq6393 122 7e-26
seq6231 122 7e-26
seq6202 122 7e-26
seq6153 122 7e-26
seq6003 122 7e-26
seq5985 122 7e-26
seq5417 122 7e-26
seq5389 122 7e-26
seq5237 122 7e-26
seq3718 122 7e-26
seq3368 122 7e-26
seq1599 122 7e-26
seq7798 118 9e-25
seq9075 116 3e-24
seq10964 114 1e-23
seq9252 114 1e-23
seq168 113 4e-23
seq8033 111 1e-22
seq5354 109 5e-22
seq10150 105 6e-21
seq8211 105 6e-21
seq6907 105 6e-21
seq9773 104 2e-20
seq170 95.1 1e-17
>seq8897
Length=7797
Score = 123 bits (136), Expect = 2e-26
Identities = 124/160 (78%), Gaps = 1/160 (1%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 6602 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 6543
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| | |||||||| |||
Sbjct 6542 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCC-AGGCATAAGGGGCAT 6484
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 6483 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 6444
>seq10380
Length=3306
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 1792 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 1851
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 1852 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 1911
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 1912 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 1951
>seq9588
Length=5669
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 4323 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 4264
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 4263 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 4204
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 4203 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 4164
>seq9473
Length=6007
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 1358 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 1417
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 1418 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 1477
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 1478 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 1517
>seq9286
Length=6592
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 1626 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 1685
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 1686 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 1745
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 1746 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 1785
>seq9098
Length=7156
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 2498 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 2439
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 2438 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 2379
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 2378 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 2339
>seq8966
Length=7575
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 6441 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 6382
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 6381 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 6322
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 6321 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 6282
>seq8747
Length=8287
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 4440 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 4381
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 4380 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 4321
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 4320 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 4281
>seq8432
Length=9237
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 4721 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 4780
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 4781 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 4840
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 4841 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 4880
>seq8215
Length=9977
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 5663 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 5722
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 5723 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 5782
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 5783 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 5822
>seq7826
Length=11303
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 7788 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 7729
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 7728 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 7669
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 7668 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 7629
>seq7819
Length=11350
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 6727 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 6786
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 6787 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 6846
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 6847 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 6886
>seq6540
Length=16408
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 2588 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 2529
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 2528 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 2469
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 2468 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 2429
>seq6393
Length=17093
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 2020 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 2079
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 2080 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 2139
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 2140 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 2179
>seq6231
Length=17917
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 564 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 623
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 624 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 683
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 684 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 723
>seq6202
Length=18018
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 12939 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 12998
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 12999 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 13058
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 13059 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 13098
>seq6153
Length=18252
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 8974 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 9033
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 9034 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 9093
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 9094 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 9133
>seq6003
Length=19109
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 7777 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 7718
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 7717 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 7658
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 7657 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 7618
>seq5985
Length=19233
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 16986 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 17045
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 17046 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 17105
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 17106 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 17145
>seq5417
Length=22711
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 8450 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 8509
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 8510 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 8569
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 8570 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 8609
>seq5389
Length=22889
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 17476 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 17535
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 17536 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 17595
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 17596 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 17635
>seq5237
Length=24259
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 12823 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 12764
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 12763 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 12704
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 12703 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 12664
>seq3718
Length=40642
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 35903 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 35962
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 35963 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 36022
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 36023 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 36062
Score = 120 bits (132), Expect = 3e-25
Identities = 124/160 (78%), Gaps = 2/160 (1%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 1277 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 1218
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| | ||||||||| ||
Sbjct 1217 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCC-AGGCATAAGGGC-AT 1160
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 1159 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 1120
>seq3368
Length=46237
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 1144 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 1203
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 1204 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 1263
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 1264 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 1303
>seq1599
Length=101989
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 18989 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 18930
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 18929 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 18870
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 18869 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 18830
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 53610 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 53669
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 53670 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 53729
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 53730 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 53769
>seq7798
Length=11408
Score = 118 bits (130), Expect = 9e-25
Identities = 123/160 (77%), Gaps = 1/160 (1%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 7771 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 7830
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| ||||||||| ||
Sbjct 7831 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGC-AT 7889
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 7890 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 7929
>seq9075
Length=7221
Score = 116 bits (128), Expect = 3e-24
Identities = 123/160 (77%), Gaps = 3/160 (2%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 4581 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 4640
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| | |||||||| ||||||| |||| ||||||||| |
Sbjct 4641 GATCGCGACCCTTTGTCCGG-CCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGC--T 4697
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 4698 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 4737
>seq10964
Length=1329
Score = 114 bits (126), Expect = 1e-23
Identities = 123/160 (77%), Gaps = 2/160 (1%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 450 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 509
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||| || |||||| |||| | |||||||| |||
Sbjct 510 GATCGCGACCCTTTGTCCCGGCCATTG-ATAGCGTGTGTCGCCC-AGGCATAAGGGGCAT 567
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 568 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 607
>seq9252
Length=6712
Score = 114 bits (126), Expect = 1e-23
Identities = 122/160 (76%), Gaps = 1/160 (1%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | ||| ||| ||||| | |||||||||
Sbjct 6121 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 6180
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | || |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 6181 ATCG-CGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 6239
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 6240 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 6279
>seq168
Length=346658
Score = 113 bits (124), Expect = 4e-23
Identities = 121/160 (76%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||| | ||| | ||| ||| ||||| | |||||||||
Sbjct 73129 CGAGTTGCAGCCTACAATCTGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGCGG 73188
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| ||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 73189 GATCGCGACCCGTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 73248
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 73249 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 73288
>seq8033
Length=10570
Score = 111 bits (122), Expect = 1e-22
Identities = 124/161 (77%), Gaps = 5/161 (3%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | || || ||| ||||| | |||||||||
Sbjct 741 CGAGTTGCAGCCTACAATCCGAACTGAGG-ACGGGTTTTGGAGTTAGCGCACCCTCGCGG 683
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGT-GAAGCCCTACCCATAAGGGCCA 120
| | ||| |||| ||| | |||||||| |||||| | |||| ||||||| ||
Sbjct 682 GATCGCGACCCTTTGTCCGG-CCATTGTAGCACGTGTTGTCGCCCAGGGCATAAGG--CA 626
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
||| ||||||||||||||| ||||||||||||| || ||||
Sbjct 625 TGATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 585
>seq5354
Length=23149
Score = 109 bits (120), Expect = 5e-22
Identities = 120/160 (75%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| | | | ||| ||| ||||| | |||||| ||
Sbjct 10356 CGAGTTGCAGCCTACAATCCGAATTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGTGG 10297
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 10296 TATCGCGACCCTTTGTCGCGGCCATTGTAGCACGTGTGTTGCCCAGGGCATAAGGGGCAT 10237
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 10236 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 10197
>seq10150
Length=3986
Score = 105 bits (116), Expect = 6e-21
Identities = 124/160 (78%), Gaps = 7/160 (4%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| ||| | || ||| ||| ||||| | |||| ||||
Sbjct 3537 CGAGTTGCAGCCTACAATCCGAACTGAGG-ACGGTTTTTGGAGTTAGCGCACCCT-GCGG 3594
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | || |||| ||| | |||||||| ||||||| ||| | ||||||||| ||
Sbjct 3595 ATCG-CGACCCTTTGTCCGG-CCATTGTAGCACGTGTGTCGCC--AGGCATAAGGGC-AT 3649
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 3650 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 3689
>seq8211
Length=9992
Score = 105 bits (116), Expect = 6e-21
Identities = 120/160 (75%), Gaps = 1/160 (1%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| |||||||||| | | | ||| ||| ||||| | |||||| ||
Sbjct 7592 CGAGTTGCAGCCTACAATCCGAATTGAGGACGGGTTTTTGGAGTTAGCGCACCCTCGTGG 7533
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| ||| |||| ||| | ||||||| ||||||| |||| |||||||| |||
Sbjct 7532 TATCGCGACCCTTTGTC-GCGGCATTGTAGCACGTGTGTTGCCCAGGGCATAAGGGGCAT 7474
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 7473 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 7434
>seq6907
Length=14713
Score = 105 bits (116), Expect = 6e-21
Identities = 124/163 (76%), Gaps = 6/163 (4%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACAC---TTTCTGGGATTAGCTCCCCCTCG 58
|||||||||| |||||||||| ||| | || ||| ||| ||||| | ||||||
Sbjct 649 CGAGTTGCAG-CTACAATCCGAACTGAGGAACGGGTTTTTGTGGAGTTAGCGCACCCTCG 591
Query 59 CGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGC 118
|||| || || |||| ||| | |||||| ||||||| |||| ||||||||
Sbjct 590 CGGGATG-CGACCCTTTGTCCCGGC-ATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGG 533
Query 119 CATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
||||| ||||||||||||||| ||||||||||||| || ||||
Sbjct 532 CATGATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 490
>seq9773
Length=5159
Score = 104 bits (114), Expect = 2e-20
Identities = 121/161 (75%), Gaps = 3/161 (2%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCC-CTCGCG 60
|||||||||| |||||||||| ||| | ||| ||| ||||| | || | | ||
Sbjct 820 CGAGTTGCAGCCTACAATCCGAACTGAGGACGGGTTTTTGGAGTTAGCGCACCTCGCCCG 761
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
|| | ||| |||| ||| |||||||| ||||||| |||| | ||||||| ||
Sbjct 760 GGATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCGGC--ATAAGGGGCA 703
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
||| ||||||||||||||| ||||||||||||| || ||||
Sbjct 702 TGATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 662
>seq170
Length=346336
Score = 95.1 bits (104), Expect = 1e-17
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 55 CTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAA 114
|||||||| | ||| |||| ||| ||||||||| ||||||| |||| | |||||
Sbjct 26485 CTCGCGGGATCGCGACCCTTTGTCCCGACCATTGTAGCACGTGTGTCGCCCAAGGCATAA 26544
Query 115 GGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
||| ||||| ||||||||||||||| ||| |||||||| || ||||
Sbjct 26545 GGGGCATGATGACTTGACGTCATCCTCACTTTCCTCCGACTTATCAC 26591
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 415955226700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |