Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20bursa-pastoris_20[genbank_20GCA_5F001974645.1_202017-01- 29] 8,186 sequences; 268,430,517 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq2559 82.4 7e-14 >seq2559 Length=1683 Score = 82.4 bits (90), Expect = 7e-14 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 7 CGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGG 66 |||||||||||| ||| | ||||||| |||||||||| || ||||||| ||||| || Sbjct 30 CGGTGGATGCCTTGGCGATGAGAGGCGACGAAGGACGTGCTACGCTGCGATAAGCTGTGG 89 Query 67 GGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 ||| || | | ||||||| |||| ||||||||||| ||||| Sbjct 90 GGAGCTGCGAAGGAGCTTTGATCCACAGATTTCCGAATGGGGAAACCC 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476762188866