Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20bursa-pastoris_20[genbank_20GCA_5F001974645.1_202017-01- 29] 8,186 sequences; 268,430,517 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq359 129 2e-27 >seq359 Length=1415783 Score = 129 bits (142), Expect = 2e-27 Identities = 107/131 (82%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 156 ACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAAC 215 ||||||| ||||||| ||| ||||||||||| ||| || ||||||||||||||||||||| Sbjct 335263 ACAGGTGGTGCATGGCTGTAGTCAGCTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAAC 335322 Query 216 GAGCGCAACCCTTAAGCTTAGTTGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGG 275 |||||||||||| | |||||||||| | || |||| || || || | | |||||| Sbjct 335323 GAGCGCAACCCTCGTGTTTAGTTGCCACCGTTGAGTTTGGAACCCTGAACAGTTTGCCGG 335382 Query 276 TGACAAACCGG 286 ||| || |||| Sbjct 335383 TGATAAGCCGG 335393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503876882560