Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20bursa-pastoris_20[genbank_20GCA_5F001974645.1_202017-01- 29] 8,186 sequences; 268,430,517 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq126 78.8 2e-12 >seq126 Length=830300 Score = 78.8 bits (86), Expect = 2e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 134 CAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGT 193 |||||| ||| ||||| || ||||| |||||||||||||||||||||| ||| |||| Sbjct 333865 CAGACTTTCGCACATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGT 333806 Query 194 GTCTCAGT 201 |||||||| Sbjct 333805 GTCTCAGT 333798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068712508032