Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsella_20bursa-pastoris_20[genbank_20GCA_5F001974645.1_202017-01- 29] 8,186 sequences; 268,430,517 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq470 91.5 4e-16 >seq470 Length=744145 Score = 91.5 bits (100), Expect = 4e-16 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 106 GATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCC 165 ||||||||||||||||||| | || |||||| |||||| || ||||| ||||| ||| Sbjct 696441 GATGTGGTAGCCGTTTCTCTAGTTCTCTCTCCAAAATCGAGCCTTAATTTTCCGTTTCCC 696500 Query 166 GTTGATACCATGGTAGGCCACTATCCTACCATC 198 ||| ||| ||||||||| ||||| |||| ||| Sbjct 696501 GTTACTACTATGGTAGGCTACTATTCTACTATC 696533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510276358656