Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsicum_20annuum_20[refseq_20GCF_5F000710875.1_202015-03-11] 1,627 sequences; 2,935,884,163 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq1627 86.0 7e-15 seq10 86.0 7e-15 seq7 86.0 7e-15 seq1626 80.6 3e-13 seq775 80.6 3e-13 seq559 80.6 3e-13 seq458 80.6 3e-13 seq454 80.6 3e-13 seq378 80.6 3e-13 seq377 80.6 3e-13 seq11 80.6 3e-13 seq3 80.6 3e-13 seq1 80.6 3e-13 seq346 78.8 1e-12 seq359 77.0 3e-12 seq1481 75.2 1e-11 seq415 75.2 1e-11 seq9 75.2 1e-11 >seq1627 Length=511530 Score = 86.0 bits (94), Expect = 7e-15 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | || || ||||||| |||||||||| ||| || | ||| Sbjct 63355 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAG 63414 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 ||||| |||||| |||||| |||||||||||| || |||| Sbjct 63415 GAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 63454 Score = 80.6 bits (88), Expect = 3e-13 Identities = 87/114 (76%), Gaps = 5/114 (4%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGA----A 135 ||||||||| |||||| | ||| |||||||||||| || |||| ||| || | | Sbjct 236680 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCTTCACATCACA 236739 Query 136 ATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||| || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 236740 AAGGG-GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 236792 >seq10 Length=205736368 Score = 86.0 bits (94), Expect = 7e-15 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | || || ||||||| |||||||||| ||| || | ||| Sbjct 6586458 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAG 6586517 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 ||||| |||||| |||||| |||||||||||| || |||| Sbjct 6586518 GAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 6586557 Score = 75.2 bits (82), Expect = 1e-11 Identities = 64/79 (81%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 45 GTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGGAACTAGGCAAACTGACCCTG 104 || || ||||||| |||||||||| || || | |||||||| | |||| |||||| | Sbjct 72912636 GTAGAGTATACTATGGCGCTTGAGAAAACCATGTCGAAGGAACTCGACAAAATGACCCCG 72912695 Query 105 TAACTTCGGGATAAAGGGT 123 |||||||||||||| |||| Sbjct 72912696 TAACTTCGGGATAAGGGGT 72912714 >seq7 Length=222112641 Score = 86.0 bits (94), Expect = 7e-15 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | || || ||||||| |||||||||| ||| || | ||| Sbjct 208953963 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAG 208953904 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 ||||| |||||| |||||| |||||||||||| || |||| Sbjct 208953903 GAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGT 208953864 Score = 80.6 bits (88), Expect = 3e-13 Identities = 87/114 (76%), Gaps = 5/114 (4%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGA----A 135 ||||||||| |||||| | ||| |||||||||||| || |||| ||| || | | Sbjct 196515851 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCTTCACATCACA 196515910 Query 136 ATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||| || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 196515911 AAGGG-GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 196515963 >seq1626 Length=156781 Score = 80.6 bits (88), Expect = 3e-13 Identities = 87/114 (76%), Gaps = 5/114 (4%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGA----A 135 ||||||||| |||||| | ||| |||||||||||| || |||| ||| || | | Sbjct 109041 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCTTCACATCACA 109100 Query 136 ATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||| || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 109101 AAGGG-GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 109153 Score = 80.6 bits (88), Expect = 3e-13 Identities = 87/114 (76%), Gaps = 5/114 (4%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGA----A 135 ||||||||| |||||| | ||| |||||||||||| || |||| ||| || | | Sbjct 135107 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCTTCACATCACA 135048 Query 136 ATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||| || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 135047 AAGGG-GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 134995 >seq775 Length=50230 Score = 80.6 bits (88), Expect = 3e-13 Identities = 87/114 (76%), Gaps = 5/114 (4%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGA----A 135 ||||||||| |||||| | ||| |||||||||||| || |||| ||| || | | Sbjct 19503 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCTTCACATCACA 19444 Query 136 ATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||| || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 19443 AAGGG-GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 19391 >seq559 Length=14171 Score = 80.6 bits (88), Expect = 3e-13 Identities = 87/114 (76%), Gaps = 5/114 (4%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGA----A 135 ||||||||| |||||| | ||| |||||||||||| || |||| ||| || | | Sbjct 5255 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCTTCACATCACA 5314 Query 136 ATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||| || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 5315 AAGGG-GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 5367 >seq458 Length=30984 Score = 80.6 bits (88), Expect = 3e-13 Identities = 87/114 (76%), Gaps = 5/114 (4%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGA----A 135 ||||||||| |||||| | ||| |||||||||||| || |||| ||| || | | Sbjct 13082 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCTTCACATCACA 13141 Query 136 ATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||| || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 13142 AAGGG-GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 13194 >seq454 Length=40121 Score = 80.6 bits (88), Expect = 3e-13 Identities = 87/114 (76%), Gaps = 5/114 (4%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGA----A 135 ||||||||| |||||| | ||| |||||||||||| || |||| ||| || | | Sbjct 3260 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCTTCACATCACA 3201 Query 136 ATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||| || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 3200 AAGGG-GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 3148 >seq378 Length=14912 Score = 80.6 bits (88), Expect = 3e-13 Identities = 87/114 (76%), Gaps = 5/114 (4%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGA----A 135 ||||||||| |||||| | ||| |||||||||||| || |||| ||| || | | Sbjct 14673 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCTTCACATCACA 14614 Query 136 ATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||| || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 14613 AAGGG-GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 14561 >seq377 Length=8115 Score = 80.6 bits (88), Expect = 3e-13 Identities = 87/114 (76%), Gaps = 5/114 (4%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGA----A 135 ||||||||| |||||| | ||| |||||||||||| || |||| ||| || | | Sbjct 4735 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCTTCACATCACA 4794 Query 136 ATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||| || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 4795 AAGGG-GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 4847 >seq11 Length=220335243 Score = 80.6 bits (88), Expect = 3e-13 Identities = 87/114 (76%), Gaps = 5/114 (4%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGA----A 135 ||||||||| |||||| | ||| |||||||||||| || |||| ||| || | | Sbjct 84182179 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCTTCACATCACA 84182238 Query 136 ATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||| || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 84182239 AAGGG-GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 84182291 >seq3 Length=261510930 Score = 80.6 bits (88), Expect = 3e-13 Identities = 87/114 (76%), Gaps = 5/114 (4%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGA----A 135 ||||||||| |||||| | ||| |||||||||||| || |||| ||| || | | Sbjct 148699 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCTTCACATCACA 148758 Query 136 ATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||| || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 148759 AAGGG-GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 148811 >seq1 Length=301019445 Score = 80.6 bits (88), Expect = 3e-13 Identities = 87/114 (76%), Gaps = 5/114 (4%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGA----A 135 ||||||||| |||||| | ||| |||||||||||| || |||| ||| || | | Sbjct 127011768 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCTTCACATCACA 127011827 Query 136 ATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | ||| || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 127011828 AAGGG-GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 127011880 >seq346 Length=283012 Score = 78.8 bits (86), Expect = 1e-12 Identities = 63/76 (83%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 48 GAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGGAACTAGGCAAACTGACCCTGTAA 107 || ||||||| |||||||||| ||||| | | |||||||| || ||| |||||| |||| Sbjct 63031 GAGTATACTATGGCGCTTGAGAAAATCATGTTGAAGGAACTCGGTAAAATGACCCCGTAA 63090 Query 108 CTTCGGGATAAAGGGT 123 |||||||| || |||| Sbjct 63091 CTTCGGGAGAAGGGGT 63106 >seq359 Length=2186250 Score = 77.0 bits (84), Expect = 3e-12 Identities = 77/100 (77%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | || || ||||||| ||| |||||| ||| || | ||| Sbjct 1661381 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCACTTGAGAGAACCATGTCAAAG 1661322 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 ||||| ||||| |||||||||||||| |||| || |||| Sbjct 1661321 GAACTCAGCAAATTGACCCTGTAACTTTGGGAGAAGGGGT 1661282 >seq1481 Length=17190 Score = 75.2 bits (82), Expect = 1e-11 Identities = 121/170 (71%), Gaps = 7/170 (4%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTTAAG 83 |||| |||||| || | ||| || |||| ||| || ||| || || | ||||| Sbjct 3239 AAACCGACACAGGTGGGTAGGTAGAGAATACCTAGGGGCGCGAGACAACTCTCT-TTAAG 3181 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGA----AATGG 139 ||||| |||||| | ||| ||||||| |||| || |||| ||| || | || || Sbjct 3180 GAACTCGGCAAAATAGCCCCGTAACTTTGGGAGAAGGGGTGCCTCTTCACATCACAAAGG 3121 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || || |||||||| |||||||||||| || Sbjct 3120 G-GGTCGCAGTGACCAGGCCCGAGCGACTGTTTACCAAAAACACAGGTCT 3072 >seq415 Length=7136 Score = 75.2 bits (82), Expect = 1e-11 Identities = 90/121 (74%), Gaps = 5/121 (4%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGA----A 135 ||||||||| |||||| | ||| ||||||||| || || |||| ||| || | | Sbjct 2010 TAAGGAACTTGGCAAAATAGCCCCGTAACTTCGAGAGAAGGGGTGCCTCTTCACATCACA 1951 Query 136 ATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCA 195 | ||| || ||||| || | | || ||| |||||||| |||||||||||| || ||| | Sbjct 1950 AAGGG-GGTCGCAGTGACCATGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCTGCAA 1892 Query 196 A 196 | Sbjct 1891 A 1891 >seq9 Length=238794889 Score = 75.2 bits (82), Expect = 1e-11 Identities = 90/121 (74%), Gaps = 5/121 (4%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGA----A 135 ||||||||| |||||| | ||| |||||||||||| || |||| ||| || | | Sbjct 173649216 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCTTCACATTACA 173649157 Query 136 ATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCA 195 | ||| || ||||| || ||| || ||| |||||||| ||||||||| | || ||| | Sbjct 173649156 AAGGG-GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACGAAAAACACATGTCTCTGCAA 173649098 Query 196 A 196 | Sbjct 173649097 A 173649097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531191627458