Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capsicum_20annuum_20[refseq_20GCF_5F000710875.1_202015-03-11] 1,627 sequences; 2,935,884,163 total letters Query= AAMG01001756.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq955 571 1e-160 >seq955 Length=47832 Score = 571 bits (632), Expect = 1e-160 Identities = 318/319 (99%), Gaps = 0/319 (0%) Strand=Plus/Plus Query 1 CGAGTCAATGTCCTAGGGCATGTGTAGGGGTGGGTAAAAATGGAAATTTGAAATGTTGGG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12238 CGAGTCAATGTCCTAGGGCATGTGTAGGGGTGGGTAAAAATGGAAATTTGAAATGTTGGG 12297 Query 61 GAGAGTCCGACCCGAATGTTAAAGTCGGAGCATGCGGTGTGGATCTTGGTGATGGGACCT 120 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 12298 GAGAGTCCGACCCGAATGTTAAAGTCGGAGCATGCGGCGTGGATCTTGGTGATGGGACCT 12357 Query 121 TGGTTACCGGGTCGGTTTATCAAGGGGCCCCACATGGGTTCTTCTTAGTAAATAACAACA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12358 TGGTTACCGGGTCGGTTTATCAAGGGGCCCCACATGGGTTCTTCTTAGTAAATAACAACA 12417 Query 181 AAAAGGATGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGGAT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12418 AAAAGGATGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGGAT 12477 Query 241 TTGTGCAATCTGGATGCTGTGTGGAGATCTGAAATTTTGGATTATATTATTGTAAGTATT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12478 TTGTGCAATCTGGATGCTGTGTGGAGATCTGAAATTTTGGATTATATTATTGTAAGTATT 12537 Query 301 TATGTAAAATTAGAAAAAA 319 ||||||||||||||||||| Sbjct 12538 TATGTAAAATTAGAAAAAA 12556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918385057632