Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq5159 241 5e-61 seq1727 235 2e-59 seq10522 232 3e-58 seq3516 179 2e-42 seq5279 158 5e-36 seq3501 158 5e-36 seq3389 154 6e-35 seq12079 123 1e-25 seq3510 120 1e-24 seq4612 105 3e-20 >seq5159 Length=1180 Score = 241 bits (266), Expect = 5e-61 Identities = 224/281 (80%), Gaps = 5/281 (2%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 |||||||||||| ||||||||||||||||||| |||| | ||||||| ||| | | Sbjct 364 CGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCGAGTA 423 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522 ||||||| | || || ||| ||| || || || ||| | ||||||||| |||| Sbjct 424 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCTCGCGGGTGCACCGCCGAC 480 Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582 ||| | |||| | || || || || |||| |||||| |||| ||||||||||||||| Sbjct 481 CGACCTTGATCTTTTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATG 540 Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642 ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | Sbjct 541 GTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA 600 Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 601 CTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 641 Score = 78.8 bits (86), Expect = 4e-12 Identities = 102/140 (73%), Gaps = 1/140 (1%) Strand=Plus/Plus Query 57 AATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGAT 116 |||||||| | || ||| |||| || | || | || ||||| ||| |||||||||| Sbjct 1 AATGCAGCACAAATAGGGCGGTACATCCCGTCCACAGGGAAATACGGGC-AGAGACCGAT 59 Query 117 AGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCAC 176 |||| ||||| | | || ||||||||||| | ||| | ||||||| | ||| || | Sbjct 60 AGCGAACAAGAACCGCGAGGGAAAGATGAAAGGGACTCTCAAAAGAGATTCAAAGAGTGC 119 Query 177 GTGAAATTGTTGAAAGGGAA 196 || |||||| | |||||| Sbjct 120 TTGTAATTGTCGGGAGGGAA 139 >seq1727 Length=11058 Score = 235 bits (260), Expect = 2e-59 Identities = 222/280 (79%), Gaps = 5/280 (2%) Strand=Plus/Minus Query 406 GGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-AA 464 ||||||||||| ||||||||||||||||||| |||| | ||||||| ||| | || Sbjct 4585 GGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCGAGTAA 4526 Query 465 ACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACC 523 |||||| | || || ||| ||| || || || ||| | ||||||||| ||||| Sbjct 4525 ACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCTCGCGGGTGCACCGCCGACC 4469 Query 524 GATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGG 583 || | |||| | | || || || |||| |||||| |||| |||||||||||||||| Sbjct 4468 GACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGG 4409 Query 584 TGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC 643 |||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | | Sbjct 4408 TGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATAC 4349 Query 644 TGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||||||||||| ||||| | |||||||||||||||| Sbjct 4348 TGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 4309 Score = 156 bits (172), Expect = 2e-35 Identities = 135/166 (81%), Gaps = 1/166 (1%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 || |||||||| |||||||||||||||||| | || ||| |||||||| | || || || Sbjct 4974 TCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAATTCCGTCCAAGGC 4915 Query 95 TAAATATTGGCC-AGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||| || | |||||||||||||| ||||||| | || ||||||||||||| ||| Sbjct 4914 TAAATACGGGTCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACT 4855 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||| ||||||||| ||| || | ||||||||| | ||||||||| Sbjct 4854 TTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 4809 >seq10522 Length=1887 Score = 232 bits (256), Expect = 3e-58 Identities = 222/281 (79%), Gaps = 5/281 (2%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 |||||||||||| ||||||||||||||||||| |||| | ||||||| ||| | | Sbjct 820 CGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCGAGTA 879 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522 ||||||| | || || ||| ||| || || || ||| | ||||||||| |||| Sbjct 880 AACCCGTAAGGCGCAAGGAAGCTGATTGGCGG---GATCCCTCGCGGGTGCACCGCCGAC 936 Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582 ||| | |||| | | || || || |||| |||||| |||| ||||||||||||||| Sbjct 937 CGACCTTGATCTTATGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATG 996 Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642 ||||||||||| ||| ||| ||||||||||||||||||||||||||| ||||||| | Sbjct 997 GTGAACTATGCATGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA 1056 Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 1057 CTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 1097 Score = 163 bits (180), Expect = 1e-37 Identities = 135/165 (82%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 || |||||||| |||||||||||||||||| | || ||| |||||||| | || || || Sbjct 434 TCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAATTCCGTCCAAGGC 493 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||| ||| |||||||||||||| ||||||| | || ||||||||||||| |||| Sbjct 494 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 553 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||||||||| ||| || | ||||||||| | ||||||||| Sbjct 554 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 598 >seq3516 Length=6239366 Score = 179 bits (198), Expect = 2e-42 Identities = 210/279 (75%), Gaps = 6/279 (2%) Strand=Plus/Plus Query 407 GCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-AAA 465 |||||||||| ||||||||| | | ||||| |||| | | ||||| ||| | ||| Sbjct 2423725 GCCCGTCTTGAAACACGGACTATG-AGTCTGACATGTGTTCGAGTCAACGGGCGAGTAAA 2423783 Query 466 CCCGTGCGC-GTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCG 524 || || | |||| ||| ||| || | || ||| | ||||||||| | || | Sbjct 2423784 CCAGTAAGGTGTAAGGAAGCTGATGGGCGA---GATCCCTCGCGGGTGCACCGCCAACTG 2423840 Query 525 ATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGT 584 | | |||| | | || || || |||| |||||| |||| ||||||||||||||||| Sbjct 2423841 ACCTTGATCTTCTTAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGGT 2423900 Query 585 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCT 644 | ||||||||||| ||| ||||| ||||||||||||||||||||| ||||||| | || Sbjct 2423901 GCACTATGCCTGAGCGGGGCGAAGCTAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACT 2423960 Query 645 GGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||||||||||| || || | |||||||||||||||| Sbjct 2423961 GACGTGCAAATCGTTCTTCTGACTTGGGTATAGGGGCGA 2423999 Score = 156 bits (172), Expect = 2e-35 Identities = 130/159 (82%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||| |||||||||||||||||||| | || ||| |||||||| |||| || ||||||| Sbjct 2423347 GAGTAGAGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAATTCCTTCCAAGGCTAAAT 2423406 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| |||||||||||||| ||||||| | || ||||||||||||| |||||| || Sbjct 2423407 ACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAA 2423466 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGC 198 ||||||| ||| || | ||||||| | | |||||||| Sbjct 2423467 AGAGAGTCAAAGAGTGCTTGAAATTATCGGGAGGGAAGC 2423505 Score = 147 bits (162), Expect = 9e-33 Identities = 203/281 (72%), Gaps = 5/281 (2%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 |||||||||||| ||||| |||||||||| |||||| | ||||||| ||||| | Sbjct 2671846 CGGCCCGTCTTGAAACACAAACCAAGGAGTTTAACATATGTGCGAGTCAACGGGTGAGTA 2671905 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522 |||| || | || || ||| ||| | || || ||| | ||||||| || Sbjct 2671906 AACCTGTAAGGCGCAAGGAAGCTGATTAGCGG---GATCCCTCGCGGGTGCATTGCTAAC 2671962 Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582 || | |||| | | || || || ||| |||||| |||| ||||| |||||||| Sbjct 2671963 TGACCTTGATCTTCTGAGAAGGGTTCAAGTGTGAGCATGCCTGTCAGGACCTGAAAGATG 2672022 Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642 ||||| ||||||||| ||| |||| | || |||||||||||||||| | |||| | Sbjct 2672023 GTGAATTATGCCTGAGCGGGGCAAAGCTAAAGAAAACTCTGGTGGAGGCCCACAGCAATA 2672082 Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| | | ||||||| ||||| | |||||||||||||||| Sbjct 2672083 CTGACCTACAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 2672123 Score = 134 bits (148), Expect = 6e-29 Identities = 129/164 (79%), Gaps = 1/164 (1%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 || ||| ||||| ||||||||||||| ||| | || || |||||||||| ||||| || Sbjct 2671461 TCAACGGGTCGATTTGTTTGGGAATGTAGCCCAAATCAGGCGGTAAATTTCGTCTAAGGC 2671520 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||| ||| ||||| |||||| | ||||||| | | |||||||| |||| |||| Sbjct 2671521 TAAATATGGGCGAGAGATCGATAGTGAACAAGTACCGGAAGGGAAAGATG-AAAGGACTT 2671579 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGC 198 || ||||||||||||| || | ||||||| | |||||||| Sbjct 2671580 TGAAAAGAGAGTTAAAGAGTGCTTGAAATTATCAGGAGGGAAGC 2671623 >seq5279 Length=1201 Score = 158 bits (174), Expect = 5e-36 Identities = 134/165 (81%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 || |||||||| |||||||||||||||| | | || ||| |||||||| | || || || Sbjct 197 TCAACGAGTCGGGTTGTTTGGGAATGCATCCCAAATCGGGCGGTAAATTCCGTCCAAGGC 138 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||| ||| |||||||||||||| ||||||| | || ||||||||||||| |||| Sbjct 137 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 78 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||||||||| ||| || | ||||||||| | ||||||||| Sbjct 77 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCG 33 >seq3501 Length=2764102 Score = 158 bits (174), Expect = 5e-36 Identities = 202/275 (73%), Gaps = 5/275 (2%) Strand=Plus/Minus Query 411 GTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-AAACCCG 469 |||||| ||||| ||||||||||| | |||| | ||||||| ||||| ||||||| Sbjct 524063 GTCTTGAAACACAGACCAAGGAGTTTGACATGTGTGCGAGTCAACGGGTGAGTAAACCCG 524004 Query 470 TGCGCGT-AATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCC 528 | | | || |||| ||| || | || || | ||||||| | ||||||| | Sbjct 524003 TAAGGGGCAAGGAAATTGATTGGCGA---GATCCTTCGTGGGTGCATCGCCGACCGACCT 523947 Query 529 TGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAAC 588 |||| | | || || || ||||| ||||| |||| ||||| ||||||||||||| Sbjct 523946 TGATCTTCTGAGAAGGGTTCGAGTATGAGCAGGCCTGTCATGACCCAAAAGATGGTGAAC 523887 Query 589 TATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCG 648 ||||||||| | ||| ||||| ||||||||||||| ||||||| | ||||| | | | || Sbjct 523886 TATGCCTGAGTGGGGCGAAGCTAGAGGAAACTCTGATGGAGGCCCACAGCGATACGGACG 523827 Query 649 TGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||||| ||||| ||||||||| || ||| Sbjct 523826 TGTAAATCATTCGTCTGGCTTGGGTATATGGACGA 523792 Score = 96.9 bits (106), Expect = 1e-17 Identities = 118/160 (74%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 38 ACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAA 97 |||||| |||| | | ||||||||| | || || |||||||||| ||||||||||| Sbjct 524451 ACGAGTTCAGTTTTAGGCGAATGCAGCCCAAATAAGGTGGTAAATTTCGTCTAAAGCTAA 524392 Query 98 ATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGG 157 ||| || | |||||||||| | |||||| ||| |||||||||||| | ||| Sbjct 524391 ATACGGGTGAAAGACCGATAGTGACCAAGTACCATGAGGAAAAGATGAAAAGGGC-TTGA 524333 Query 158 AAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 ||||| ||| ||| || | ||||||| | ||||||| Sbjct 524332 AAAGATAGTCAAAGAGTGCTTGAAATTATCAGGAGGGAAG 524293 >seq3389 Length=699234 Score = 154 bits (170), Expect = 6e-35 Identities = 133/165 (81%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 || |||||||| |||||||||||||||||| | || |||| ||||||||| || || || Sbjct 252299 TCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATTGGGCAGTAAATTTCGTCCAAGGC 252358 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||| ||| |||||||||||||| ||||||| | || ||||||||||||| |||| Sbjct 252359 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 252418 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 | ||||||||| ||| || | | ||||| | | ||||||||| Sbjct 252419 TAAAAAGAGAGTCAAAGAGTGCTTAAAATTATCGGGAGGGAAGCG 252463 >seq12079 Length=2168 Score = 123 bits (136), Expect = 1e-25 Identities = 111/137 (81%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAAT-GGGAGGTAAATTTCTTCTAAAG 93 || |||||||| ||| ||||| |||||||| ||||| ||| |||||||||| | || | Sbjct 532 TCAACGAGTCGGGTTATTTGGAAATGCAGCA-TAAATCGGGCGGTAAATTTCGTTCAAGG 590 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 ||| ||| ||| |||||||||||||| ||||||| | || |||||||||||| ||| Sbjct 591 CTATATACGGGCGAGAGACCGATAGCGAACAAGTAATGCGAGGAAAAGATGAAAAGAACT 650 Query 154 TTGGAAAGAGAGTTAAA 170 ||| ||||||||| ||| Sbjct 651 TTGAAAAGAGAGTCAAA 667 >seq3510 Length=3337861 Score = 120 bits (132), Expect = 1e-24 Identities = 102/126 (81%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 || |||||||| |||||||| ||||||||| | || ||| |||||||| | || || || Sbjct 714422 TCAACGAGTCGGGTTGTTTGAGAATGCAGCCCAAATCGGGCGGTAAATTCCGTCCAAGGC 714363 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||| ||| |||||||||||||| ||||||| | || |||||||||||| |||| Sbjct 714362 TAAATACGGGCGAGAGACCGATAGCGAACAAGTACTGCGAGGCAAAGATGAAAAGGACTT 714303 Query 155 TGGAAA 160 || ||| Sbjct 714302 TGAAAA 714297 >seq4612 Length=1064 Score = 105 bits (116), Expect = 3e-20 Identities = 95/118 (81%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 38 ACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAA 97 |||||||| |||||||||||||||||| | | || ||||| || | || || ||||| Sbjct 117 ACGAGTCGGGTTGTTTGGGAATGCAGCCCAATCGGGCCGGTAA-TTCCGTCCAAGGCTAA 59 Query 98 ATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTT 155 ||| ||| |||||||||||||| ||||||| | || ||||||||||||| ||||| Sbjct 58 ATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079618962200