Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq10522 80.6 1e-13 seq5279 80.6 1e-13 seq4612 80.6 1e-13 seq3516 80.6 1e-13 seq3510 80.6 1e-13 seq3389 80.6 1e-13 seq1727 80.6 1e-13 >seq10522 Length=1887 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||| Sbjct 230 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAAACGGGAAGAGCCCAGC 288 >seq5279 Length=1201 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||| Sbjct 401 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAAACGGGAAGAGCCCAGC 343 >seq4612 Length=1064 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||| Sbjct 323 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAAACGGGAAGAGCCCAGC 265 >seq3516 Length=6239366 Score = 80.6 bits (88), Expect = 1e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||| ||||||||| |||||||||||||||| |||||||||||| Sbjct 2423138 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGTGAAATGGGAAGAGCCCA 2423194 >seq3510 Length=3337861 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||| Sbjct 714626 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAAACGGGAAGAGCCCAGC 714568 >seq3389 Length=699234 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||| Sbjct 252095 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAAACGGGAAGAGCCCAGC 252153 >seq1727 Length=11058 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||| Sbjct 5178 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAAACGGGAAGAGCCCAGC 5120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230361629760