Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq3396 75.2 1e-11 seq3389 75.2 1e-11 >seq3396 Length=760493 Score = 75.2 bits (82), Expect = 1e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || |||||| |||| ||||||||||||||||| |||||| ||||||||| | |||| Sbjct 601326 TACGCCTTTCGTGTAGGTTGGAACTTACCCGACAAGAAATTTCACTACCTTAGCATCGTT 601267 Query 173 A 173 | Sbjct 601266 A 601266 >seq3389 Length=699234 Score = 75.2 bits (82), Expect = 1e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| ||||| ||| ||||||||||||| ||||||| ||||||||||||||||||| || Sbjct 15122 TACGCCATTTGTGTGGGTCGGAACTTACTCGACAAGATATTTCGCTACCTTAGGACCATT 15181 Query 173 A 173 | Sbjct 15182 A 15182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547105833036