Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carica_20papaya_20[genbank_20GCA_5F000150535.1_202008-05-06] 17,764 sequences; 369,781,828 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq3486 80.6 2e-13 >seq3486 Length=2184632 Score = 80.6 bits (88), Expect = 2e-13 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 83 CCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCA 142 |||||||| ||||||| ||| |||||||| ||||| ||||||||||||||| || Sbjct 1464045 CCATTGTAGCACGTGTGTCGCCTAGGGCATAAGGGGCATGATGACTTGACGTCATCCTCA 1464104 Query 143 CCTTCCTCCGGTTTGTCAC 161 ||||||||||| || |||| Sbjct 1464105 CCTTCCTCCGGATTATCAC 1464123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415928411080