Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27] 463,906 sequences; 661,937,708 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq45150 75.2 7e-12 seq65439 71.6 8e-11 >seq45150 Length=6624 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | |||| |||||| |||||||||||||||||||||| | |||||||| Sbjct 1253 TTCAATCGGTAGGA-GCGATGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCAA 1196 Query 122 GCT 124 ||| Sbjct 1195 GCT 1193 >seq65439 Length=1177 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | |||||||||| |||||||||||||||||||||| | |||||| | Sbjct 774 TTCAATCGGTAGGA-GCGACGGGCGATGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 717 Query 122 GCT 124 ||| Sbjct 716 GCT 714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299491785080