Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27] 463,906 sequences; 661,937,708 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq102272 199 8e-49 seq26943 163 6e-38 seq335433 127 4e-27 seq454752 125 1e-26 seq273576 125 1e-26 seq335676 107 4e-21 seq212149 107 4e-21 seq32313 107 4e-21 seq273862 95.1 2e-17 seq267036 95.1 2e-17 seq211474 95.1 2e-17 seq371555 93.3 8e-17 seq243989 93.3 8e-17 seq305221 87.8 4e-15 seq286699 86.0 1e-14 seq145819 82.4 2e-13 seq16558 77.0 6e-12 seq226339 73.4 8e-11 >seq102272 Length=6284 Score = 199 bits (220), Expect = 8e-49 Identities = 225/299 (75%), Gaps = 18/299 (6%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||||||||| Sbjct 633 GCTCCGTCAGGCTTTCGCCCATTGCGAAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCT 692 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||| ||||||| |||||||| || |||||| | || ||||| || ||| Sbjct 693 GGGCCGTGTCTTAGTCCCAGTGTGGCCGAACATCCTCTCGGACCAGCTACTAATTATCGC 752 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGC-GAT 185 |||||| ||||||| ||||||||||| |||||| | | ||||||| || | ||| ||| Sbjct 753 CTTGGTATGCTATTACCTCACCAACTAGCTAATCAGACACGAGCCCCTCCTCGAGCAGAT 812 Query 186 AAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTC 245 || || ||| |||| | | || | ||||||||| ||||| Sbjct 813 TCCTCCTT------------TTGC--TCCTTAGCC--TACGGGGTATTAGCAGCTGTTTC 856 Query 246 CAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 || |||| |||| | | || |||||||| || ||| ||||||||||||||||||||| Sbjct 857 CAGCCGTTGTTCCCCACCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCGCCACT 914 >seq26943 Length=6662 Score = 163 bits (180), Expect = 6e-38 Identities = 131/158 (83%), Gaps = 4/158 (3%) Strand=Plus/Minus Query 22 CCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGT 81 |||| ||| | || || |||||||||||||||||||||||||||||||||||||||||| Sbjct 5475 CCCCTNTTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGT 5416 Query 82 CCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTAT-- 139 |||| |||||| | ||| |||||| | || ||||| |||| ||| |||||| ||||| Sbjct 5415 CCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTA 5356 Query 140 --TATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 || ||||||||||| |||||| | ||||||||| || Sbjct 5355 CGTACCTCACCAACTAGCTAATCAGACGCGAGCCCCTC 5318 >seq335433 Length=212 Score = 127 bits (140), Expect = 4e-27 Identities = 120/153 (78%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || ||||||||||||| |||| ||||||| Sbjct 201 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGCAGGAGTCC 142 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||||||||||| ||||| | ||| || || || |||| ||| | || Sbjct 141 GGGCCGTGTCTCAGTCCCAGTGTGGTTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 82 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159 |||||| || ||| | |||||||||||||| Sbjct 81 CTTGGTCAGCCTTTACCAGACCAACTACCTAAT 49 >seq454752 Length=1270 Score = 125 bits (138), Expect = 1e-26 Identities = 121/154 (79%), Gaps = 1/154 (1%) Strand=Plus/Plus Query 19 TTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTC 78 |||| |||||| || || ||||||| ||||||||| |||||| |||||||||||| Sbjct 853 TTTCGGCCATTGCAAAAAATTCCCCACTACTGCCTCCCATAGGAGCTTGGGCCGTGTCTT 912 Query 79 AGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTA 138 ||| ||| ||||| | ||| ||||| | || || || |||| ||| |||||| |||| Sbjct 913 AGT-CCAGGGTGGCTGATCATTCTCTCGGACCAGCCACTGATCATCGTCTTGGTAAGCTA 971 Query 139 TTATCTCACCAACTACCTAATCGGCCGCGAGCCC 172 ||| |||||||||| |||||| | ||||||||| Sbjct 972 TTACTTCACCAACTAGCTAATCAGACGCGAGCCC 1005 >seq273576 Length=5696 Score = 125 bits (138), Expect = 1e-26 Identities = 99/119 (83%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||||| |||| |||||| | || || ||||||||||||||||||| ||||| |||| || Sbjct 5110 TCAGGCTTTCGTCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTTGGAGTTTGGGTCG 5051 Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGG 131 ||||||||||||| |||||| | ||| |||||||| || ||| | |||| ||| ||||| Sbjct 5050 TGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTGCTGATCATCGCCTTGG 4992 >seq335676 Length=212 Score = 107 bits (118), Expect = 4e-21 Identities = 97/121 (80%), Gaps = 1/121 (1%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| || || |||||||||||| || |||| Sbjct 13 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCAGAAAATTCCCCACTGCTGCAACC-GTAG 71 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||| | |||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 72 GAGTCTAGTCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 131 Query 121 C 121 | Sbjct 132 C 132 >seq212149 Length=832 Score = 107 bits (118), Expect = 4e-21 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 19 TTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTC 78 |||| ||||||| | || || ||||||||||||||||||||||||||||||||||||||| Sbjct 117 TTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTC 176 Query 79 AGTCCCAATGTGGC 92 ||||||| |||||| Sbjct 177 AGTCCCAGTGTGGC 190 >seq32313 Length=5265 Score = 107 bits (118), Expect = 4e-21 Identities = 85/102 (83%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 74 GTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTG 133 |||||||||||| |||||| | ||| |||||| | || ||||| |||| ||| |||||| Sbjct 1100 GTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTA 1159 Query 134 GGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 ||||||| ||||||||||| |||||| | ||||||||| || Sbjct 1160 AGCTATTACCTCACCAACTAGCTAATCAGACGCGAGCCCCTC 1201 >seq273862 Length=4756 Score = 95.1 bits (104), Expect = 2e-17 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 25 CCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCC 84 |||||| | || || |||||||||||||||||||||||||||||||||||||||| |||| Sbjct 3907 CCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAATCCC 3966 Query 85 AATGTGGCCGTTCAA 99 | |||| | ||| || Sbjct 3967 AGTGTGACTGTTAAA 3981 >seq267036 Length=6159 Score = 95.1 bits (104), Expect = 2e-17 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 3 CGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGA 62 ||||||| | ||||| |||| ||| || | || || ||||||||||| ||||||| || Sbjct 4226 CGTCGCTCCGTCAGGCTTTCGTCCAGTGCGGAAAATTTCCCACTGCTGCTTCCCGTAAGA 4167 Query 63 GTCTGGGCCGTGTCTCAGTCCCAATGT 89 ||||||||||||||||||||||| ||| Sbjct 4166 GTCTGGGCCGTGTCTCAGTCCCAGTGT 4140 >seq211474 Length=317 Score = 95.1 bits (104), Expect = 2e-17 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 52 CTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCG 111 |||||||||||||||||||||||||||||||||| |||||| ||| |||||| | || Sbjct 115 CTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTAATCATCCTCTCGGACCA 174 Query 112 GCTACCGATCGTCGGCTTGG 131 ||||| |||| ||| ||||| Sbjct 175 GCTACTGATCATCGCCTTGG 194 >seq371555 Length=237 Score = 93.3 bits (102), Expect = 8e-17 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 24 CCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCC 83 |||||||| ||| || ||||||||||||| |||| |||||| |||| |||||||||||| Sbjct 66 CCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGCGGGAGTCCGGGCTGTGTCTCAGTCC 125 Query 84 CAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132 || |||||| | ||| || || || |||| ||| | |||||||| Sbjct 126 CAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGT 174 >seq243989 Length=4776 Score = 93.3 bits (102), Expect = 8e-17 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 3863 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 3804 Query 61 GAGTCTGGGCCGTGTC 76 |||||||||||||||| Sbjct 3803 GAGTCTGGGCCGTGTC 3788 >seq305221 Length=8958 Score = 87.8 bits (96), Expect = 4e-15 Identities = 51/53 (96%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 40 CCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGC 92 |||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct 1912 CCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCATGTCTCAGTCCCAGTGTGGC 1860 >seq286699 Length=6347 Score = 86.0 bits (94), Expect = 1e-14 Identities = 85/109 (78%), Gaps = 1/109 (1%) Strand=Plus/Plus Query 63 GTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCC-GGCTACCGATC 121 |||| |||||||||||||||||| | |||| | ||| |||||| | || | ||| ||| Sbjct 2196 GTCTAGGCCGTGTCTCAGTCCCACTATGGCTGATCATCCTCTCGGACCAGTTTACTAATC 2255 Query 122 GTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGC 170 || ||||| ||||||| |||| |||||| |||||| | ||||||| Sbjct 2256 ATCACCTTGGAAAGCTATTACCTCATCAACTAGCTAATCAGACGCGAGC 2304 >seq145819 Length=358 Score = 82.4 bits (90), Expect = 2e-13 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || ||| |||||||| ||| || ||||||||||||| |||| |||||| Sbjct 129 GCTGGATCGGGCTTTTGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGCGGGAGTCC 188 Query 67 GGGCCGTGTCTCAGT 81 ||||||||||||||| Sbjct 189 GGGCCGTGTCTCAGT 203 >seq16558 Length=7468 Score = 77.0 bits (84), Expect = 6e-12 Identities = 64/77 (83%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| |||||| | || || || |||||||||||||| ||| Sbjct 947 GGCATTGCTCCGTCAGGCTTTCGTCCATTGCGGAAAATTCCTCACTGCTGCCTCCC-TAG 1005 Query 61 GAGTCTGGGCCGTGTCT 77 ||||||||||||||||| Sbjct 1006 GAGTCTGGGCCGTGTCT 1022 >seq226339 Length=17695 Score = 73.4 bits (80), Expect = 8e-11 Identities = 48/53 (91%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 27 ATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCA 79 |||| | || || |||||||||||||||||||||||||||||| ||||||||| Sbjct 14878 ATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGGCGTGTCTCA 14826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 993768362496