Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27] 463,906 sequences; 661,937,708 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq229751 206 4e-51 seq264005 187 4e-45 seq180632 174 2e-41 seq92813 167 4e-39 seq446918 132 7e-29 seq293668 129 9e-28 seq176795 127 3e-27 seq86373 122 1e-25 seq344791 102 1e-19 seq187558 93.3 7e-17 seq52751 93.3 7e-17 seq421768 91.5 2e-16 seq409059 91.5 2e-16 seq297892 91.5 2e-16 seq302538 84.2 3e-14 seq28884 84.2 3e-14 seq338046 82.4 1e-13 seq247541 82.4 1e-13 seq211212 82.4 1e-13 seq114421 82.4 1e-13 seq197833 78.8 1e-12 >seq229751 Length=6412 Score = 206 bits (228), Expect = 4e-51 Identities = 147/169 (87%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 107 CCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGG 166 ||||||||||||||||| ||| || ||||||||| || |||||||| |||||| || Sbjct 5842 CCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGG 5783 Query 167 ACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGC 226 ||||||||||||| |||||||||||||||||||| ||| || |||||||||||||||||| Sbjct 5782 ACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGC 5723 Query 227 CCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||||||||||| || |||| |||||||||| | || |||||||||||| Sbjct 5722 CCAACCCTTGGAACATACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 5674 >seq264005 Length=7871 Score = 187 bits (206), Expect = 4e-45 Identities = 197/258 (76%), Gaps = 1/258 (0%) Strand=Plus/Minus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGG-CA 75 ||||||||| |||| | | |||| ||| |||| ||| |||| | | ||||| || Sbjct 885 CTTAGATGCTTTCAACAGTCATCCACTCCGCACTTGGCTACCCAACGTTTACCTTGGGCA 826 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 | ||| ||| |||| ||||| |||| |||||| |||||||||||| | || |||| Sbjct 825 CGATAACCGGTACACCGGAGGTGCGTCCTTCCCGGACCTCTCGTACTAGTGGAAGGTCCT 766 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 ||||| || |||||||| |||| | |||||||| ||| || ||||||||||||||| Sbjct 765 CTCAATGCTCTAACGCCCACACCGGAAATGGACCGAATTGTTTCACGACGTTCTGAACCC 706 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 |||| || | |||||||||||||||| ||||||| |||| || |||| |||| |||| Sbjct 705 AGCTTATGTAGCACTTTAATGGGCGAACAACCCAACCTTTGGAACATACTACAGCTCCAG 646 Query 256 GATGAGACGAGCCGACAT 273 | | || |||||||||| Sbjct 645 GTGGCGAAGAGCCGACAT 628 >seq180632 Length=3360 Score = 174 bits (192), Expect = 2e-41 Identities = 184/241 (76%), Gaps = 1/241 (0%) Strand=Plus/Plus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCA 75 ||||||||| |||| | ||||| ||| |||| | | |||| | | | | | |||| Sbjct 1624 CTTAGATGCTTTCAACAGTTATCAACTCCGCACTTGGGTACCCAACGTTTACCGTGGGCA 1683 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 | ||||||| | |||||| ||| ||||||||||||||||||| ||| || |||| Sbjct 1684 CGATAACTGGTACCGTAGAGGTGCATCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCT 1743 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 ||| ||| |||||||| || ||| | ||||||||||||| |||||||||||||| Sbjct 1744 TTCATTGTTCTAACGCCCACACCGAATATGAACCGAACTGTCTCATGACGTTCTGAACCC 1803 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 | ||| || || |||||||||||||||| | |||||||||| || |||| |||| |||| Sbjct 1804 AACTCACGGACCGCTTTAATGGGCGAACAACACAACCCTTGGAACATACTACAGCTCCAG 1863 Query 256 G 256 | Sbjct 1864 G 1864 >seq92813 Length=2788 Score = 167 bits (184), Expect = 4e-39 Identities = 130/155 (84%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 121 CTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCG 180 ||| ||| || ||||||||| || |||||||| |||||| ||||||||||||||| Sbjct 1 CTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCA 60 Query 181 CGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGAC 240 ||| |||||||| ||||||| ||| || |||||||||| |||||||||||||||||| || Sbjct 61 CGATGTTCTGAAGCCAGCTCACGTACCGCTTTAATGGGTGAACAGCCCAACCCTTGGAAC 120 Query 241 CTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||| |||||||||| | || |||||||||||| Sbjct 121 ATACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 155 >seq446918 Length=771 Score = 132 bits (146), Expect = 7e-29 Identities = 96/111 (86%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 165 GGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACA 224 ||||||||||||||| ||| |||||||||||| ||| ||| || |||| |||||||||| Sbjct 113 GGACCGAACTGTCTCACGATGTTCTGAACCCAACTCACGTACCGTTTTATTGGGCGAACA 54 Query 225 GCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||||||||||||| || |||| |||||||||| | || |||||||||||| Sbjct 53 GCCCAACCCTTGGAACATACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 3 >seq293668 Length=4761 Score = 129 bits (142), Expect = 9e-28 Identities = 100/118 (85%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAA--CCCAGCTCGCGTGCCTCTTTAATGG 217 |||||| ||||||||||||| ||||||||| || |||| ||| ||| || ||| ||| | Sbjct 1966 GATAGGAACCGAACTGTCTCACGACGTTCTAAAAACCCAACTCACGTACCACTTCAATCG 2025 Query 218 GCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||||||| || |||||||||||||| ||||| |||||||||| || ||| |||||||| Sbjct 2026 GCGAACAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACATCG 2083 >seq176795 Length=6334 Score = 127 bits (140), Expect = 3e-27 Identities = 91/105 (87%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 166 GACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAG 225 |||||||||||||| |||||||||||||||||||| ||| || |||||||||| ||||| Sbjct 3164 GACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGTGAACAA 3223 Query 226 CCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGA 270 |||||||||||| || |||| |||||||||| | || ||| ||| Sbjct 3224 CCCAACCCTTGGAACATACTACAGCCCCAGGTGGCGAAGAGTCGA 3268 >seq86373 Length=1576 Score = 122 bits (134), Expect = 1e-25 Identities = 96/115 (83%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 100 GTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACG 159 |||| ||||||||||||||||||| ||| || ||||||||| || |||| ||| | Sbjct 112 GTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCTCACACTG 171 Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAA 214 |||| |||||||||||| || |||||||||||||||||||| ||| || |||||| Sbjct 172 GATATGGACCGAACTGTGTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAA 226 >seq344791 Length=217 Score = 102 bits (112), Expect = 1e-19 Identities = 80/95 (84%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAA--CCCAGCTCGCGTGCCTCTTTAATGG 217 |||||| ||||||||||||| ||||||||| || |||| ||| ||| || ||| ||| | Sbjct 123 GATAGGAACCGAACTGTCTCACGACGTTCTAAAAACCCAACTCACGTACCACTTGAATCG 182 Query 218 GCGAACAGCCCAACCCTTGGGACCTACTTCAGCCC 252 ||||||| || |||||||||||||| ||||| ||| Sbjct 183 GCGAACAACCGAACCCTTGGGACCTTCTTCAACCC 217 >seq187558 Length=5483 Score = 93.3 bits (102), Expect = 7e-17 Identities = 75/91 (82%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 132 TCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGA 191 ||||||||| || | |||||| | |||| ||| ||||||||||| ||||||||||| Sbjct 3163 TCCTCTCAATGCTCTAATGCCCACATCAGATATGGATCGAACTGTCTCACGACGTTCTGA 3222 Query 192 ACCCAGCTCGCGTGCCTCTTTAATGGGCGAA 222 ||||||||| ||| || ||||||||| |||| Sbjct 3223 ACCCAGCTCACGTACCGCTTTAATGGACGAA 3253 >seq52751 Length=3029 Score = 93.3 bits (102), Expect = 7e-17 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 202 CGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAG 261 ||| || ||||||||||||||||||||||||||||| || |||| |||||||||| | | Sbjct 1880 CGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAGGTGGCG 1939 Query 262 ACGAGCCGACATCG 275 | |||||||||||| Sbjct 1940 ATGAGCCGACATCG 1953 >seq421768 Length=353 Score = 91.5 bits (100), Expect = 2e-16 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 158 CGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGG 217 |||||| ||||||||||||||| |||||||||||||||||||| ||| || ||||||||| Sbjct 352 CGGATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGG 293 Query 218 GCGAA 222 || || Sbjct 292 GCTAA 288 >seq409059 Length=300 Score = 91.5 bits (100), Expect = 2e-16 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 191 AACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGC 250 |||||||||| || || |||||||||||||||||||||||||||| || |||| || | Sbjct 105 AACCCAGCTCATGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGTAACATACTACAAC 164 Query 251 CCCAGGATGAGACGAGCCGACATCG 275 |||||| | | |||||||||||| Sbjct 165 CCCAGGTGGCAAAGAGCCGACATCG 189 >seq297892 Length=1196 Score = 91.5 bits (100), Expect = 2e-16 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 ||||| || ||| ||||| || ||| |||| |||||| ||||||||||||||| | Sbjct 1104 TAAGGTAAGGTCCCCTCAATGCTCTAACGGCCACACCGGATATGGACCGAACTGTCTCAC 1163 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAA 214 ||||||||||||||||||| ||| || |||||| Sbjct 1164 GACGTTCTGAACCCAGCTCACGTACCGCTTTAA 1196 >seq302538 Length=7074 Score = 84.2 bits (92), Expect = 3e-14 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 || |||||||| |||||| | |||||||||||| ||| |||||||||||| || Sbjct 3513 GATGTTCTGAATGCAGCTCATGCAAGGCTTTAATGGGCGGACATCCCAACCCTTGGAACA 3454 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||| |||||||||| | || |||||||||||| Sbjct 3453 TACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 3420 >seq28884 Length=5443 Score = 84.2 bits (92), Expect = 3e-14 Identities = 60/68 (88%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 170 GAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCA 229 |||||||||| ||||||||| |||||| ||| ||| || ||||||||||||||| |||| Sbjct 5126 GAACTGTCTCACGACGTTCT-AACCCAACTCACGTACCGTTTTAATGGGCGAACAACCCA 5068 Query 230 ACCCTTGG 237 |||||||| Sbjct 5067 ACCCTTGG 5060 >seq338046 Length=214 Score = 82.4 bits (90), Expect = 1e-13 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||| ||||||||||||||| ||||||| |||||||||||| ||| || ||||||||| | Sbjct 70 GATATGGACCGAACTGTCTCACGACGTTTTGAACCCAGCTCACGTACCGCTTTAATGGAC 129 Query 220 GAA 222 ||| Sbjct 130 GAA 132 >seq247541 Length=6731 Score = 82.4 bits (90), Expect = 1e-13 Identities = 74/92 (80%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 49 CTTAGCTTCCCAGC-TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCC 107 ||| ||| |||||| | | | | |||| | ||||||| |||||||||| |||| ||| Sbjct 6235 CTTGGCTACCCAGCGTTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCC 6294 Query 108 CGGTCCTCTCGTACTAAGGACAGCTCCTCTCA 139 |||||||||||||||| ||| || |||||||| Sbjct 6295 CGGTCCTCTCGTACTAGGGAAAGGTCCTCTCA 6326 >seq211212 Length=605 Score = 82.4 bits (90), Expect = 1e-13 Identities = 74/92 (80%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 72 GGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGC 131 |||| | ||||||| |||||||||| ||| ||||||||||||||||||| ||| || Sbjct 92 GGCACGATAACTGGTACACCAGAGGTGCGTCT-TCCCGGTCCTCTCGTACTAGGGAAAGG 34 Query 132 TCCTCTCAAATTTCCTACGCCCACGACGGATA 163 ||||||||| || |||||||| |||||| Sbjct 33 TCCTCTCAATGCTCTAACGCCCACACCGGATA 2 >seq114421 Length=5123 Score = 82.4 bits (90), Expect = 1e-13 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 126 GACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACG 185 || || || ||||| ||| |||| ||| |||||| | |||||||| ||| | | Sbjct 4401 GAAAGGTCATCTCAGTGCTCCAACGCTCACATCGGATATGAACCGAACTATCTTATAATG 4342 Query 186 TTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCC 233 | ||||||||||||| ||| || |||||| ||||||||||||||||| Sbjct 4341 TCCTGAACCCAGCTCACGTACCGTTTTAATCGGCGAACAGCCCAACCC 4294 >seq197833 Length=992 Score = 78.8 bits (86), Expect = 1e-12 Identities = 57/66 (86%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 132 TCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGA 191 ||||||||| || |||||||| |||||| ||||||||||||||| ||||||||||| Sbjct 303 TCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGA 362 Query 192 ACCCAG 197 |||||| Sbjct 363 ACCCAG 368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777291015016