Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27] 463,906 sequences; 661,937,708 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq102272 226 7e-57 seq273576 167 6e-39 seq26943 156 1e-35 seq335433 152 1e-34 seq335676 143 6e-32 seq454752 125 2e-26 seq212149 113 1e-22 seq371555 111 4e-22 seq243989 107 5e-21 seq145819 107 5e-21 seq211474 105 2e-20 seq16558 105 2e-20 seq195394 104 6e-20 seq32313 104 6e-20 seq273862 95.1 3e-17 seq386230 91.5 4e-16 seq267036 91.5 4e-16 seq305221 89.7 1e-15 seq233014 87.8 4e-15 seq434655 80.6 6e-13 seq203678 80.6 6e-13 seq286699 77.0 8e-12 seq431218 73.4 1e-10 seq247057 73.4 1e-10 seq226339 73.4 1e-10 >seq102272 Length=6284 Score = 226 bits (250), Expect = 7e-57 Identities = 293/403 (73%), Gaps = 30/403 (7%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||| | |||||||| | | |||||| ||| ||| | |||||||| |||||||| Sbjct 596 TTCACGACCAGTGGGCCTTCTACCTCCACGCGACATTGCTCCGTCAGGCTTTCGCCCATT 655 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||||||||||||||||||||||||||||| |||||||| ||| ||||||| Sbjct 656 GCGAAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTTAGTCCCAGTGT 715 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||| | ||||||||| ||||||||| || |||||| ||| || |||||| | ||| Sbjct 716 GGCCGAACATCCTCTCGGACCAGCTACTAATTATCGCCTTGGTATGCTATTACCTCACCA 775 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| | | | | ||| || ||| ||| ||| |||| Sbjct 776 ACTAGCTAATCAGACACGAGCCCCTCCTCGAG-CAGA---------TTCCTCCT-TTTGC 824 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 || | | | || | ||||||||| | |||||||| ||| | |||| || |||| Sbjct 825 TCCTTAGCC--TACGGGGTATTAGCAGCTGTTTCCAGCCGTTGTTCCCCACCCAAGGGCA 882 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| | | |||||||||||||||||||| ||| || || |||| Sbjct 883 GGTTCTTACGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC--- 928 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCA 407 |||| |||||||||||||||| || ||||||||||||||| Sbjct 929 ---CCGTCCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCA 968 >seq273576 Length=5696 Score = 167 bits (184), Expect = 6e-39 Identities = 134/162 (83%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| |||||||| | | |||||||||| | | |||||||| || ||||| Sbjct 5153 TTCACGACCCGTGGGCCTTCTACCTCCACGCGGCATTGATCTGTCAGGCTTTCGTCCATT 5094 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||||||||||||||||||| ||||| ||| ||||||||||| ||||||| Sbjct 5093 GCGGAAAATTCCCCACTGCTGCCTCCCGTTGGAGTTTGGGTCGTGTCTCAGTCCCAGTGT 5034 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGG 166 ||||| ||||||||||||||||||| |||| |||||| || Sbjct 5033 GGCTGATCATCCTCTCAGACCAGCTGCTGATCATCGCCTTGG 4992 >seq26943 Length=6662 Score = 156 bits (172), Expect = 1e-35 Identities = 117/137 (85%), Gaps = 4/137 (3%) Strand=Plus/Minus Query 63 TTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 122 ||| | || |||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 5469 TTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 5410 Query 123 GTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCAT----TACC 178 ||||||| |||||||||| ||||||||| |||| |||||| ||| || || |||| Sbjct 5409 GTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTACGTACC 5350 Query 179 CCGCCAACTAGCTAATC 195 | |||||||||||||| Sbjct 5349 TCACCAACTAGCTAATC 5333 >seq335433 Length=212 Score = 152 bits (168), Expect = 1e-34 Identities = 132/164 (80%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 31 CACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCC 90 |||||| || |||| ||| ||||| |||||||||| ||| |||||||||||||||| || Sbjct 212 CACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCC 153 Query 91 CGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA 150 || ||||||| || |||||||||||| ||||||||| || |||||| |||||||||| Sbjct 152 CGCAGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGTTGATCATCCGAAAAGACCAGCTA 93 Query 151 GGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAAT 194 | ||| | | || ||| ||| ||||| ||||||| ||||| Sbjct 92 AGCATCATTGGCTTGGTCAGCCTTTACCAGACCAACTACCTAAT 49 >seq335676 Length=212 Score = 143 bits (158), Expect = 6e-32 Identities = 108/126 (86%), Gaps = 1/126 (1%) Strand=Plus/Plus Query 31 CACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCC 90 |||||||||| ||| | |||||||| ||||||||| || ||||||||||||||| || Sbjct 8 CACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCAGAAAATTCCCCACTGCTGCAACC 67 Query 91 CGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTA 150 |||||||||| | |||||||||||| |||||||||||| |||||||||| ||||||||| Sbjct 68 -GTAGGAGTCTAGTCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTA 126 Query 151 GGGATC 156 |||| Sbjct 127 CTGATC 132 >seq454752 Length=1270 Score = 125 bits (138), Expect = 2e-26 Identities = 115/144 (80%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 52 GCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTC 111 |||| || |||||| || |||||||||| ||||||||| |||||| ||| ||||||| Sbjct 851 GCTTTCGGCCATTGCAAAAAATTCCCCACTACTGCCTCCCATAGGAGCTTGGGCCGTGTC 910 Query 112 TCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGC 171 | ||| |||| ||||||| |||| ||||| ||||||| | |||| ||| || ||| || Sbjct 911 TTAGT-CCAGGGTGGCTGATCATTCTCTCGGACCAGCCACTGATCATCGTCTTGGTAAGC 969 Query 172 CATTACCCCGCCAACTAGCTAATC 195 ||||| | |||||||||||||| Sbjct 970 TATTACTTCACCAACTAGCTAATC 993 >seq212149 Length=832 Score = 113 bits (124), Expect = 1e-22 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 53 CTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCT 112 ||| ||||||||| | || |||||||||||||||||||||||||||||||| |||||||| Sbjct 116 CTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCT 175 Query 113 CAGTTCCAGTGTGGCTG 129 |||| |||||||||||| Sbjct 176 CAGTCCCAGTGTGGCTG 192 >seq371555 Length=237 Score = 111 bits (122), Expect = 4e-22 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 57 CGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT 116 |||||||||| ||| |||||||||||||||| |||| |||||| || | |||||||||| Sbjct 64 CGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGCGGGAGTCCGGGCTGTGTCTCAGT 123 Query 117 TCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGT 167 |||||||||||| |||||| |||||||||| | ||| | | || ||| Sbjct 124 CCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGT 174 >seq243989 Length=4776 Score = 107 bits (118), Expect = 5e-21 Identities = 71/79 (90%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 33 CGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCG 92 |||||||| ||| | |||||||| ||||||||| | || ||||||||||||||||||||| Sbjct 3866 CGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCG 3807 Query 93 TAGGAGTCTGGACCGTGTC 111 ||||||||||| ||||||| Sbjct 3806 TAGGAGTCTGGGCCGTGTC 3788 >seq145819 Length=358 Score = 107 bits (118), Expect = 5e-21 Identities = 94/116 (81%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 3 ACTTTACAACCCGAA--GGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 ||||||||| | | | | ||||||||| |||||| || |||| ||| ||||| ||| Sbjct 88 ACTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTTGCC 147 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT 116 |||||| ||| |||||||||||||||| |||| |||||| || |||||||||||| Sbjct 148 CATTGTCCAAGATTCCCCACTGCTGCCCCCCGCGGGAGTCCGGGCCGTGTCTCAGT 203 >seq211474 Length=317 Score = 105 bits (116), Expect = 2e-20 Identities = 77/88 (88%), Gaps = 1/88 (1%) Strand=Plus/Plus Query 87 CTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCA 146 ||||||||||||||||| |||||||||||| ||||||||||| |||||||||| ||||| Sbjct 115 CTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTAATCATCCTCTCGGACCA 174 Query 147 GCTAGGGATCGTCGCCTAGG-TGGGCCA 173 |||| |||| |||||| || || |||| Sbjct 175 GCTACTGATCATCGCCTTGGNTGAGCCA 202 >seq16558 Length=7468 Score = 105 bits (116), Expect = 2e-20 Identities = 89/108 (82%), Gaps = 1/108 (1%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| |||||||| | | ||||||||| ||| | |||||||| || ||||| Sbjct 916 TTCACGACCCGTGGGCCTTCTACCTCAACGCGGCATTGCTCCGTCAGGCTTTCGTCCATT 975 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCT 112 | | || ||||| |||||||||||||| ||||||||||| |||||||| Sbjct 976 GCGGAAAATTCCTCACTGCTGCCTCCC-TAGGAGTCTGGGCCGTGTCT 1022 >seq195394 Length=3242 Score = 104 bits (114), Expect = 6e-20 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| ||||||||| | | |||||||||| ||| | |||||||| || ||||| Sbjct 1179 TTCACGACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGTCCATT 1238 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACC 106 | || |||||||||||||||||| | ||||||||||| || Sbjct 1239 GCAGAAAATTCCCCACTGCTGCCTCTCATAGGAGTCTGGGCC 1280 >seq32313 Length=5265 Score = 104 bits (114), Expect = 6e-20 Identities = 75/87 (86%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 109 GTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTG 168 |||||||| |||||||||||| |||||||||| ||||||||| |||| |||||| ||| Sbjct 1100 GTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTA 1159 Query 169 GGCCATTACCCCGCCAACTAGCTAATC 195 || |||||| | |||||||||||||| Sbjct 1160 AGCTATTACCTCACCAACTAGCTAATC 1186 >seq273862 Length=4756 Score = 95.1 bits (104), Expect = 3e-17 Identities = 63/70 (90%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 60 CCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 119 |||||| | || |||||||||||||||||||||||||||||||| |||||||||| | || Sbjct 3907 CCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAATCCC 3966 Query 120 AGTGTGGCTG 129 |||||| ||| Sbjct 3967 AGTGTGACTG 3976 >seq386230 Length=254 Score = 91.5 bits (100), Expect = 4e-16 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 109 GTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTG 168 ||||||||||||||||||||| |||||||||||||||||||| |||| |||||| ||| Sbjct 183 GTCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACTGATCATCGCCTTGGTA 242 Query 169 GGCCATTACC 178 || |||||| Sbjct 243 AGCTATTACC 252 >seq267036 Length=6159 Score = 91.5 bits (100), Expect = 4e-16 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 42 GCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 101 ||| | |||||||| || ||| || | || ||| ||||||||||| ||||||| |||||| Sbjct 4222 GCTCCGTCAGGCTTTCGTCCAGTGCGGAAAATTTCCCACTGCTGCTTCCCGTAAGAGTCT 4163 Query 102 GGACCGTGTCTCAGTTCCAGTGT 124 || |||||||||||| ||||||| Sbjct 4162 GGGCCGTGTCTCAGTCCCAGTGT 4140 >seq305221 Length=8958 Score = 89.7 bits (98), Expect = 1e-15 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 74 TCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGG 130 |||||||||||||||||||||||||||||| || ||||||||| ||||||||||||| Sbjct 1913 TCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCATGTCTCAGTCCCAGTGTGGCTGG 1857 >seq233014 Length=24435 Score = 87.8 bits (96), Expect = 4e-15 Identities = 87/112 (78%), Gaps = 3/112 (3%) Strand=Plus/Minus Query 32 ACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCC 91 |||| ||| ||| ||| ||| || |||||| | || ||||| ||||||||||||| Sbjct 12793 ACGCATCATTGCTCTGTCACACTTTCGTCCATTGCGGAAAATTCCTCACTGCTGCCTCCT 12734 Query 92 GTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTG---GCTGGTCATCCTCTC 140 |||||||| |||||| ||||||| | | |||||| | || |||||||||| Sbjct 12733 GTAGGAGTTTGGACCATGTCTCAATCCTAGTGTGACTGATGATCATCCTCTC 12682 >seq434655 Length=469 Score = 80.6 bits (88), Expect = 6e-13 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 102 GGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGC 161 || |||||||||||| |||||||||||| |||||||||| ||||||||| |||| |||| Sbjct 469 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGC 410 Query 162 CT 163 || Sbjct 409 CT 408 >seq203678 Length=685 Score = 80.6 bits (88), Expect = 6e-13 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 100 CTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTC 159 |||| |||||||||||| |||||||||||| |||||||||| ||||||||| |||| || Sbjct 62 CTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATC 3 Query 160 GC 161 || Sbjct 2 GC 1 >seq286699 Length=6347 Score = 77.0 bits (84), Expect = 8e-12 Identities = 77/99 (78%), Gaps = 1/99 (1%) Strand=Plus/Plus Query 98 GTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAG-CTAGGGATC 156 |||| | |||||||||||| ||| | |||||| |||||||||| |||||| || ||| Sbjct 2196 GTCTAGGCCGTGTCTCAGTCCCACTATGGCTGATCATCCTCTCGGACCAGTTTACTAATC 2255 Query 157 GTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATC 195 || ||| || || |||||| | ||||||||||||| Sbjct 2256 ATCACCTTGGAAAGCTATTACCTCATCAACTAGCTAATC 2294 >seq431218 Length=426 Score = 73.4 bits (80), Expect = 1e-10 Identities = 51/58 (88%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 31 CACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCT 88 |||||||||| ||| | |||||||| ||||||||| | || ||||||||||||||||| Sbjct 58 CACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCT 1 >seq247057 Length=6013 Score = 73.4 bits (80), Expect = 1e-10 Identities = 58/70 (83%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 21 CTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCAC 80 |||||||| |||||| || |||| ||| ||||| |||||||||| ||| ||||||||| Sbjct 660 CTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCAC 719 Query 81 TGCTGCCTCC 90 || |||| || Sbjct 720 TGTTGCCCCC 729 >seq226339 Length=17695 Score = 73.4 bits (80), Expect = 1e-10 Identities = 48/53 (91%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 62 ATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCA 114 |||| | || |||||||||||||||||||||||||||||||| ||||||||| Sbjct 14878 ATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGGCGTGTCTCA 14826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1216729213056