Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27] 463,906 sequences; 661,937,708 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq330477 134 5e-29 seq69713 122 3e-25 seq125273 120 1e-24 seq28689 120 1e-24 seq273584 113 2e-22 seq236338 113 2e-22 seq171009 107 6e-21 seq346656 91.5 5e-16 seq158783 91.5 5e-16 seq65288 91.5 5e-16 seq170814 89.7 2e-15 seq304150 87.8 6e-15 seq301911 86.0 2e-14 seq168725 86.0 2e-14 seq300296 78.8 3e-12 seq176657 75.2 4e-11 >seq330477 Length=210 Score = 134 bits (148), Expect = 5e-29 Identities = 86/94 (91%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 |||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct 185 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACATGGAATTTCGCTACCTTAGGAC 126 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||| ||||||||| || |||||||| Sbjct 125 CGTTATAGTTACGACCGCCGTTCACCGGGGCTTC 92 >seq69713 Length=1391 Score = 122 bits (134), Expect = 3e-25 Identities = 76/82 (93%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 752 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 693 Query 446 GGTTATAGTTACCACCGCCGTT 467 ||||||||||| |||||||| Sbjct 692 CGTTATAGTTACGGCCGCCGTT 671 >seq125273 Length=5212 Score = 120 bits (132), Expect = 1e-24 Identities = 106/130 (82%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCG 409 ||||||||| |||| | ||||||| | || |||||||||| ||||||| ||||| Sbjct 189 ATTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCG 131 Query 410 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTA 469 ||||||||| |||||||||||||||| ||||||| ||||||||||| |||||||| | Sbjct 130 GAACTTACCTGACAAGGAATTTCGCTTGCTTAGGACCGTTATAGTTACAGCCGCCGTTCA 71 Query 470 CTGGGGCTTC 479 | |||| ||| Sbjct 70 CCGGGGTTTC 61 >seq28689 Length=7434 Score = 120 bits (132), Expect = 1e-24 Identities = 106/130 (82%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCG 409 ||||||||| |||| | | ||||||| | || ||||||||| ||||||| ||||| Sbjct 5439 ATTTCACCGAGCCTCTCTTCGAGACAGT-GCCCAGATCGTTACGCTTTTCGTGCGGGTCG 5381 Query 410 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTA 469 ||||||||||||||||||||||||||||||| || ||||||||||| | |||||| | Sbjct 5380 AAACTTACCCGACAAGGAATTTCGCTACCTTATGACCGTTATAGTTACGGCTGCCGTTCA 5321 Query 470 CTGGGGCTTC 479 |||||||| Sbjct 5320 TCGGGGCTTC 5311 >seq273584 Length=9990 Score = 113 bits (124), Expect = 2e-22 Identities = 76/85 (89%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 |||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct 5754 TCGTTACGCCTTTCGTGCGGGTCAGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 5813 Query 446 GGTTATAGTTACCACCGCCGTTTAC 470 ||||||||||| || ||||| || Sbjct 5814 CGTTATAGTTACGGCCACCGTTCAC 5838 >seq236338 Length=1025 Score = 113 bits (124), Expect = 2e-22 Identities = 86/102 (84%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 355 CACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACT 414 ||||||| | || |||||||| ||| || |||||| |||||||||||||||| ||| Sbjct 870 CACCGGGTCCATGTCGGAGACAGCGGGGCAGCCGTTACACCATTCGTGCAGGTCGCTACT 929 Query 415 TACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTA 456 || ||||||||||||||||||||||||||| |||| ||||| Sbjct 930 TATGCGACAAGGAATTTCGCTACCTTAGGATAGTTAGAGTTA 971 >seq171009 Length=2772 Score = 107 bits (118), Expect = 6e-21 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 397 TTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTA 456 ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1720 TTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTA 1661 Query 457 CCACCGCCGTTTACTGG 473 | |||||||| || || Sbjct 1660 CGGCCGCCGTTCACCGG 1644 >seq346656 Length=219 Score = 91.5 bits (100), Expect = 5e-16 Identities = 53/55 (96%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 390 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 444 |||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 156 TACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 102 >seq158783 Length=8053 Score = 91.5 bits (100), Expect = 5e-16 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 391 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTA 450 ||||| ||| ||| |||||||||||| |||||||| |||||||||||||||| || ||| Sbjct 1676 ACGCCTTTCATGCCGGTCGGAACTTATCCGACAAGAAATTTCGCTACCTTAGTATCATTA 1735 Query 451 TAGTTACCACCGCCGTTT 468 ||||||| |||||| || Sbjct 1736 TAGTTACGGCCGCCGCTT 1753 >seq65288 Length=3470 Score = 91.5 bits (100), Expect = 5e-16 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430 |||||| | ||| ||||||||| |||||| ||||||| | ||||| |||||||||||| Sbjct 1795 GAGACAACGGGGCAGTCGTTACACCATTCATGCAGGTTGCTACTTATACGACAAGGAATT 1854 Query 431 TCGCTACCTTAGGATGGTTA 450 |||||||||||||| |||| Sbjct 1855 TCGCTACCTTAGGACAGTTA 1874 >seq170814 Length=5502 Score = 89.7 bits (98), Expect = 2e-15 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 402 GCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACC 461 |||||||| ||||| ||||||||||||||||||||||| || |||| |||||| || Sbjct 4369 GCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTATGACAGTTAGAGTTACTGCC 4428 Query 462 GCCGTTTACTGGGGCTTCAATT 483 || |||||| |||||||| ||| Sbjct 4429 GCTGTTTACCGGGGCTTCCATT 4450 >seq304150 Length=2271 Score = 87.8 bits (96), Expect = 6e-15 Identities = 67/78 (86%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||||| || ||||||| |||||||||||||| ||||| | ||||||| ||||||||| Sbjct 909 TCGTTACACCTTTCGTGCGGGTCGGAACTTACCGGACAAAG-ATTTCGCCACCTTAGGAC 851 Query 446 GGTTATAGTTACCACCGC 463 ||||||||||| |||| Sbjct 850 CGTTATAGTTACGGCCGC 833 >seq301911 Length=1839 Score = 86.0 bits (94), Expect = 2e-14 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 398 TCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATA 452 |||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 684 TCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACAGTTATA 630 >seq168725 Length=5198 Score = 86.0 bits (94), Expect = 2e-14 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 397 TTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTA 456 ||||| | |||||||| |||| |||||||||||||||||||||||||| |||||||||| Sbjct 3998 TTCGTACGGGTCGGAATTTACTCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTA 4057 Query 457 CCACCGCCGT 466 | || |||| Sbjct 4058 CGGCCACCGT 4067 >seq300296 Length=16380 Score = 78.8 bits (86), Expect = 3e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 388 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 443 |||||||| || |||| |||||||||||||||||| || ||||||||||||||||| Sbjct 7674 GTTACGCCTTTTGTGCGGGTCGGAACTTACCCGACGAGAAATTTCGCTACCTTAGG 7619 >seq176657 Length=19965 Score = 75.2 bits (82), Expect = 4e-11 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 444 || |||||| ||| || |||||||||||||||||||||||||||| ||||||||||| Sbjct 17402 TCATTACGCTTTTCATGTGGGTCGGAACTTACCCGACAAGGAATTTCTCTACCTTAGGA 17344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1694502464256