Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Carthamus_20tinctorius_20[genbank_20GCA_5F001633085.1_202016-04-27]
463,906 sequences; 661,937,708 total letters
Query= NC_031927.1
Length=216121
Score E
Sequences producing significant alignments: (Bits) Value
seq229264 84.2 3e-11
>seq229264
Length=2642
Score = 84.2 bits (92), Expect = 3e-11
Identities = 169/251 (67%), Gaps = 0/251 (0%)
Strand=Plus/Plus
Query 162580 AACTACAGGGAAAGCTATGACATACATGCCTCTAGCGGTATTCTATTCAATCACGAAAGC 162639
|| ||||||||| || | || ||||| | ||| ||||| ||||| ||||||
Sbjct 904 AATTACAGGGAAGCATACGGGATCTTTGCCTGCAACGGCATTCTCTTCAACCACGAATCA 963
Query 162640 TCACGCAGAGGAGAGACGTTCGTCACACGCAAGATCGTCCGAGCCTTGTCCCGAATTAGT 162699
| |||||||| || | || || || | |||||| |||| || ||| || |
Sbjct 964 CCTCGCAGAGGTGAAAACTTTGTGACCAGAAAGATCACAAGAGCAGTGGGCCGGATCAAG 1023
Query 162700 GTGGGACTCCAAAGTGATCTACAACTTGGAAACCTCAATGCCCGACGTGACTGGGGACAC 162759
| || ||||| || | || | || || || | || | | |||||||| |
Sbjct 1024 ATTGGCCTCCAGAGCAAGCTGTTTTTAGGGAATCTGCAGGCTTCAAGAGACTGGGGGTTC 1083
Query 162760 GCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTTCAGCAAGAGAAGCCAGATGATTAT 162819
|| |||||||| ||||| |||||| ||||||| |||||||||||||| || || ||
Sbjct 1084 GCAGGGGACTACGTGGAGGCAATGTGGCTGATGCTACAGCAAGAGAAGCCCGACGACTAC 1143
Query 162820 GTGATCGCAAC 162830
||| | |||||
Sbjct 1144 GTGGTGGCAAC 1154
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 687449549104560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |