Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq113287 89.7 4e-16 seq34631 84.2 2e-14 >seq113287 Length=565 Score = 89.7 bits (98), Expect = 4e-16 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| |||||||||||||||| |||| || ||||| | || Sbjct 394 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCGCTAATCCCACCGTGGTCGCCTGCC 335 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 || ||||| | | |||| || |||| |||||||||||||||||||||||| Sbjct 334 CCCTTGCGGTTAGCGCAGCGCCTTCGGGTGAAACCAACTCCCATGGTGTGACGGGCGGTG 275 Query 135 TGTA 138 |||| Sbjct 274 TGTA 271 >seq34631 Length=2721 Score = 84.2 bits (92), Expect = 2e-14 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| |||||||||||||||| || | || ||||| | || Sbjct 1041 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCGCTAAACCCACCGTGGTCGCCTGCC 1100 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 ||| ||||| | | |||| || | || |||||||||||||||||||||||| Sbjct 1101 TCCTTGCGGTTAGCGCAACGCCTTCGGGTGAATCCAACTCCCATGGTGTGACGGGCGGTG 1160 Query 135 TGTA 138 |||| Sbjct 1161 TGTA 1164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345167171640