Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq40442 199 4e-49 seq82721 188 8e-46 seq100089 187 3e-45 seq89684 152 6e-35 seq55509 152 6e-35 seq61548 149 7e-34 seq40643 140 4e-31 seq79953 136 4e-30 seq63307 134 2e-29 seq30163 131 2e-28 seq30817 118 1e-24 seq26518 116 4e-24 seq4295 107 2e-21 seq26038 100 3e-19 seq86785 93.3 5e-17 seq51715 89.7 6e-16 seq27156 87.8 2e-15 seq20075 86.0 7e-15 seq97405 84.2 2e-14 seq4224 84.2 2e-14 seq114258 78.8 1e-12 seq33142 78.8 1e-12 seq7191 78.8 1e-12 seq82772 73.4 4e-11 >seq40442 Length=2067 Score = 199 bits (220), Expect = 4e-49 Identities = 147/180 (82%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||||| | ||||||| |||||||||||||||| ||||||||||||| | Sbjct 1722 CGGGGTCTTTCCGTCCCGTGGCGGGTACTCGGCATCTTCACCGAGACTACAATTTCACCG 1663 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 ||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 1662 AGCTCACGGCTGAGACAGCACCCAAATCGTTACACCATTCGTGCAGGTCGGAACTTACCC 1603 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1602 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 1543 >seq82721 Length=965 Score = 188 bits (208), Expect = 8e-46 Identities = 130/151 (86%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||||| | |||||||| |||| ||||||||||||| |||||||||| | Sbjct 804 CGGGGTCTTTCCGTCCCGTTGCGGGTAACCGGCGTCTTCACCGATACCACAATTTCACCG 863 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 |||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct 864 AGCTCATGGCTGAGACAGCGCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCC 923 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 924 GACAAGGAATTTCGCTACCTTAGGACCGTTA 954 >seq100089 Length=714 Score = 187 bits (206), Expect = 3e-45 Identities = 129/150 (86%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83 ||||||||| |||||| | |||||||| |||| ||||||||||||| |||||||||| || Sbjct 139 GGGGTCTTTCCGTCCCGTTGCGGGTAACCGGCGTCTTCACCGATACCACAATTTCACCGA 198 Query 84 GCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 ||||| || |||||||| ||||||||||||||||||||||||||||||| Sbjct 199 GCTCATGGCTGAGACAGCGCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCCG 258 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 259 ACAAGGAATTTCGCTACCTTAGGACCGTTA 288 >seq89684 Length=858 Score = 152 bits (168), Expect = 6e-35 Identities = 122/151 (81%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | |||||| | | |||||||||| | | | ||||||||||| Sbjct 585 CGGGGTCTTTCCGTCTGACCGCGGGAACCCCGCATCTTCACGGGGAATTCAATTTCACTG 526 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 |||| ||| | ||||||| ||| |||||||||||||||||||||||||| Sbjct 525 AGCTGACGTTGGAGACAGCGGGGAAGTCATTACGCCATTCGTGCAGGTCGGAACTTACCC 466 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 465 GACAAGGAATTTCGCTACCTTAGGACCGTTA 435 >seq55509 Length=1917 Score = 152 bits (168), Expect = 6e-35 Identities = 122/151 (81%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||||||||| |||||||| |||||||||||||| |||||||| ||| | | Sbjct 1064 CGGGGTCTTTTCGTCTAGCTGCGGGTAACCGGCATCTTCACCGGTACTACAAGTTCGCCG 1005 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 ||| ||| |||||| ||| |||||||||||||||||||||||||| Sbjct 1004 AGCAACTCGTTAAGACAGTCGTACGATCGTTACTCCATTCGTGCAGGTCGGAACTTACCC 945 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 944 GACAAGGAATTTCGCTACCTTAGGACCGTTA 914 >seq61548 Length=1597 Score = 149 bits (164), Expect = 7e-34 Identities = 121/151 (80%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | ||| || | | |||||||||| | | | ||||||||||| Sbjct 1120 CGGGGTCTTTCCGTCTGACCGCAGGAACCCCGCATCTTCACGGGGAATTCAATTTCACTG 1061 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 |||| ||| | ||||||| ||| |||||||||||||||||||||||||| Sbjct 1060 AGCTGACGTTGGAGACAGCGGGGAAGTCATTACGCCATTCGTGCAGGTCGGAACTTACCC 1001 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 1000 GACAAGGAATTTCGCTACCTTAGGACCGTTA 970 >seq40643 Length=2153 Score = 140 bits (154), Expect = 4e-31 Identities = 118/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| | |||||||| | |||||||||| | | | ||||||| ||||| Sbjct 1515 GGGTCTTTCCGTCTGACCGCGGGTACCCCGCATCTTCACGGGGAATTCAATTTCGCTGAG 1574 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 || | | ||||||| ||| |||||||||||||||||||||||||||| Sbjct 1575 TCCATGCTGGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGA 1634 Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||| Sbjct 1635 CAAGGAATTTCGCTACCTTAGGACCGTTA 1663 >seq79953 Length=1030 Score = 136 bits (150), Expect = 4e-30 Identities = 117/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| | |||||||| | |||||||||| | | | ||||||| ||||| Sbjct 167 GGGTCTTTCCGTCTGACCGCGGGTACCCCGCATCTTCACGGGGAATTCAATTTCGCTGAG 226 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 | || ||||||| ||| |||||||||||||||||||||||||||| Sbjct 227 CCCATACCGGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGA 286 Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||| Sbjct 287 CAAGGAATTTCGCTACCTTAGGACCGTTA 315 >seq63307 Length=693 Score = 134 bits (148), Expect = 2e-29 Identities = 118/151 (78%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | ||| || | | |||||||||| | | | ||||||||||| Sbjct 331 CGGGGTCTTTCCGTCTGACCGCAGGAACCCCGCATCTTCACGGGGAATTCAATTTCACTG 272 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || | | | ||||||| ||| |||||||||||||||||||||||||| Sbjct 271 AGTCTATGCTGGAGACAGCGGGGAGATCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 212 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 211 GACAAGGAATTTCGCTACCTTAGGACCGTTA 181 >seq30163 Length=3926 Score = 131 bits (144), Expect = 2e-28 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| ||||| ||| |||| ||||||| || || | ||||||| | | Sbjct 715 CGGGGTCTTTCCGTCCTGCTGCGCGTAACGAGCATCTTTACTCGTAGTGCAATTTCGCCG 774 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || || |||||||||||| ||| |||||||||||||||||||||||||| Sbjct 775 AGTTCGCGGTTGAGACAGCTGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 834 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTT 201 ||||||||||||||||||||||||| |||| |||||||||||||| Sbjct 835 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 893 >seq30817 Length=1561 Score = 118 bits (130), Expect = 1e-24 Identities = 116/151 (77%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83 ||||||||| |||| |||||||| ||||| |||| | | | ||| ||| |||| Sbjct 555 GGGGTCTTTCCGTCTAGCCGCGGGTAGATTGCATCATCACAAACATTTCAACTTCGCTGA 614 Query 84 GCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || ||| | |||||| ||| |||||||||||||||||||||||||| Sbjct 615 G-TCTCGGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 673 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 674 GACAAGGAATTTCGCTACCTTAGGACCGTTA 704 >seq26518 Length=4982 Score = 116 bits (128), Expect = 4e-24 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| ||||| ||| |||| ||||||| || || | ||||||| | | Sbjct 1139 CGGGGTCTTTCCGTCCTGCTGCGCGTAACGAGCATCTTTACTCGTAGTGCAATTTCGCCG 1198 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || | ||| ||||||| ||| |||||||||||||||||||||||||| Sbjct 1199 AGTCCGTGGTCGAGACAGCGCCCAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 1258 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||| |||| Sbjct 1259 GACAAGGAATTTCGCTACCTTAGGATGGTTA 1289 >seq4295 Length=44677 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| | || |||| || |||||||||| || | | ||||||| ||| Sbjct 34030 GGGTCTTTCTGTCCAAGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 34089 Query 85 CTCACGGT-TGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 || | | |||||||| ||| || || |||| |||| ||||||||||| Sbjct 34090 -TCTCTCTCTGAGACAGTGCCCAGATCGTTACGCCTTTTGTGCTGGTCAGAACTTACCCG 34148 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 34149 ACAAGGAATTTCGCTACCTTAGGACCGTTA 34178 >seq26038 Length=5935 Score = 100 bits (110), Expect = 3e-19 Identities = 110/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 1733 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACGGACATGTCTATTTCACCGAG 1792 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| |||||| ||||||| |||| ||||||||| | Sbjct 1793 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACACCTTTCGTGCGGGTCAGAACTTACCTG 1851 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGT 171 |||||||||||||||||||||||||||| Sbjct 1852 ACAAGGAATTTCGCTACCTTAGGACCGT 1879 >seq86785 Length=904 Score = 93.3 bits (102), Expect = 5e-17 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 171 ||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 847 TACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 789 >seq51715 Length=2123 Score = 89.7 bits (98), Expect = 6e-16 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 117 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 || ||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 854 CCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATCGTTA 910 >seq27156 Length=4319 Score = 87.8 bits (96), Expect = 2e-15 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct 4318 TACGCCTTTCGTGCTGGTTAGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 4259 Query 173 A 173 | Sbjct 4258 A 4258 >seq20075 Length=7577 Score = 86.0 bits (94), Expect = 7e-15 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 117 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 || || |||| ||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 5975 CCTTTTGTGCGGGTCGGAACTTACCCGACAAGAAATTTCGCTACCTTAGGACCGTTA 6031 >seq97405 Length=749 Score = 84.2 bits (92), Expect = 2e-14 Identities = 87/118 (74%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 54 GCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNNNNNNNNNNT 113 |||||||||| | || | |||||||| || | | | ||||||| | Sbjct 133 GCATCTTCACGGTTATTTCAATTTCATGGAAATAATTCTGGAGACAGTGGAGCAGTCGTT 192 Query 114 ACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 171 || || ||| ||| || ||||||||||||| ||||||||||||||||||||||||||| Sbjct 193 ACGCCGTTCATGCGGGACGGAACTTACCCGCCAAGGAATTTCGCTACCTTAGGACCGT 250 >seq4224 Length=44573 Score = 84.2 bits (92), Expect = 2e-14 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||||| ||||||||||||||||||||||||||| |||||| ||||| |||| Sbjct 41163 TACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTTGCTACCATAGGATCGTT 41222 Query 173 A 173 | Sbjct 41223 A 41223 >seq114258 Length=555 Score = 78.8 bits (86), Expect = 1e-12 Identities = 100/142 (70%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 ||||||| |||| | |||||| || |||||||||| || | | ||||||||||||| Sbjct 187 GGGTCTTACCGTCTTTTTTCGGGTACTCCGCATCTTCACGGAGAATTCAATTTCACTGAG 128 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 || | | ||||||| || |||||| |||||| | | ||| | Sbjct 127 TCCATGTTGGAGACAGTGGGGCAGTCGTGACGCCATTCATGCAGGGCACTAATTAGGTGT 68 Query 145 CAAGGAATTTCGCTACCTTAGG 166 |||||||||||||||||||||| Sbjct 67 CAAGGAATTTCGCTACCTTAGG 46 >seq33142 Length=2957 Score = 78.8 bits (86), Expect = 1e-12 Identities = 91/124 (73%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 47 GTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGNNNNN 105 ||| || |||||||||| || | | ||||||| ||| || | | ||||||| Sbjct 790 GTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG-TCTCTCTCCGAGACAGTACCC 732 Query 106 NNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 165 ||| || ||| ||| |||| ||||||||| ||||||||||||||||||||||| Sbjct 731 AGATCGTTACGCCTTTCATGCGGGTCTGAACTTACCAGACAAGGAATTTCGCTACCTTAG 672 Query 166 GACC 169 |||| Sbjct 671 GACC 668 >seq7191 Length=30449 Score = 78.8 bits (86), Expect = 1e-12 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||||| | |||||||||||| |||||| ||||||||||| ||||||||||| Sbjct 20358 TACGCCTTTCGTGCCGATCGGAACTTACCAGACAAGAAATTTCGCTACTTTAGGACCGTT 20299 Query 173 A 173 | Sbjct 20298 A 20298 >seq82772 Length=966 Score = 73.4 bits (80), Expect = 4e-11 Identities = 40/40 (100%), Gaps = 0/40 (0%) Strand=Plus/Minus Query 132 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 171 |||||||||||||||||||||||||||||||||||||||| Sbjct 966 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546491844711