Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq34631 251 1e-64 seq58431 206 4e-51 seq24532 181 2e-43 seq107464 141 2e-31 seq72046 134 2e-29 seq88163 129 1e-27 seq18499 125 1e-26 seq26518 105 1e-20 seq98213 100 5e-19 seq31939 91.5 2e-16 seq11188 87.8 3e-15 seq55717 86.0 1e-14 >seq34631 Length=2721 Score = 251 bits (278), Expect = 1e-64 Identities = 232/291 (80%), Gaps = 2/291 (1%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| ||||||||||| | | |||||| | ||||||||||||||||||| Sbjct 1782 CCCACGCTTTCGCACCTCAGCGTCAATACCAGTCCAGTCAGCCGCCTTCGCCACTGGTGT 1841 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || |||| ||||||||| |||||||| |||||| ||||||||| | ||||||| | | Sbjct 1842 TCTTCCGAATATCTACGAATTTCACCTCTACACTCGGAATTCCACTGACCTCTCCTGGAT 1901 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGG-GTTGAGCCCATAGTTTTCACATCTGAC 179 ||||| | |||| ||||| ||| | | ||| ||||||| | | |||||| |||||| Sbjct 1902 TCAAGCGATGCAGTCTCAAAGGCA-GTTCTGGAGTTGAGCTCCAGGCTTTCACCTCTGAC 1960 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 || | |||||||| || |||||| |||| ||| |||| | |||||| || ||| | Sbjct 1961 TTACAAAGCCGCCTACGTGCGCTTTACGCCCAGTAATTCCGAACAACGCTAGCTCCCTCC 2020 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||||||||||||||||||||| ||||||||| |||||||| | |||| Sbjct 2021 GTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGAGCTTATTCTCCCGGTA 2071 >seq58431 Length=1748 Score = 206 bits (228), Expect = 4e-51 Identities = 223/289 (77%), Gaps = 10/289 (3%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| |||||||||||| | || | || || | |||||||| | |||||| Sbjct 724 CCCACGCTTTCGTGCCTCAGCGTCAATCACACTTTAGTAAGCTGCCTTCGCAATTGGTGT 783 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTAC---ACACGGAATTCCGATTGCCTCTCCAG 117 || ||||||| ||||||||||||||| ||| |||||| | |||| | | Sbjct 784 TCTGTGACATATCTATGCATTTCACCGCTACTTGTCAC---ATTCCGCCTACCTCAGCTG 840 Query 118 CACTCAAGAAAAACAGTTTCAAATGCA-GGCTATGGGTTGAGCCCATAGT-TTTCACATC 175 || ||||| |||| ||||| ||| || || ||||||| ||| || |||||| | Sbjct 841 CATTCAAGCCCGTCAGTATCAAAGGCACTGCGAT-GGTTGAG-CCACCGTCTTTCACCCC 898 Query 176 TGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCAC 235 |||||| | |||||||| | ||||||| ||||||||||||||||||||||||| | Sbjct 899 TGACTTAACAGGCCGCCTACGCACCCTTTAAACCCAATAAATCCGGATAACGCTTGGATC 958 Query 236 CTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCT 284 || |||||||||||||||||||||||| ||||||||| ||||||||| Sbjct 959 CTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGATCCTTATTCCT 1007 >seq24532 Length=5214 Score = 181 bits (200), Expect = 2e-43 Identities = 211/282 (75%), Gaps = 2/282 (1%) Strand=Plus/Plus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| |||| |||||| | | ||||| || |||||| |||||||| || Sbjct 3257 GCTTTCGTCTGTCAGTGTCAGTATCAGCCCAGCGGAGTGCTTTCGCCGTTGGTGTTCTTC 3316 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | ||||||| ||||||||||||| ||| | |||||| ||| || | | ||||||| Sbjct 3317 CCGATATCTATGCATTTCACCGCTCCACCGGAAATTCCCTCCGCCCCTACTGTACTCAAG 3376 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | ||| | | ||||| ||||| | ||||||| |||||| || Sbjct 3377 CTTTCTAGTTTCCACCGCATGTTCAGGGTTAAGCCCTGATATTTCACAATAGACTTGGCT 3436 Query 186 TCCCGCCTACACG-CCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATT 244 || ||| || | |||||||| |||||||| |||||||||||||||| || |||||| Sbjct 3437 AGCCACCT-CAGGACCCTTTACGCCCAATAATTCCGGATAACGCTTGCATCCCCCGTATT 3495 Query 245 ACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCA 286 |||||||||||||||||| ||||||||| |||||||| ||| Sbjct 3496 ACCGCGGCTGCTGGCACGGAGTTAGCCGATGCTTATTCGTCA 3537 >seq107464 Length=625 Score = 141 bits (156), Expect = 2e-31 Identities = 114/138 (83%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 153 GTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAA 212 ||||||| | || ||||||| ||||||| |||||||| |||||||||| ||||| Sbjct 615 GTTGAGCTCGAAGATTTCACACGAAACTTGCCAAACCGCCTACGCGCCCTTTACGCCCAA 556 Query 213 TAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCG 272 ||| |||| | |||||||||| || |||||||||||||||||||||||| ||||||||| Sbjct 555 TAATTCCGAACAACGCTTGCCCCCCTCGTATTACCGCGGCTGCTGGCACGAAGTTAGCCG 496 Query 273 TGGCTTATTCCTCAGGTA 290 ||||| ||| |||||| Sbjct 495 GGGCTTCTTCTACAGGTA 478 >seq72046 Length=1219 Score = 134 bits (148), Expect = 2e-29 Identities = 134/174 (77%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 109 CCTCTCCAGCACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTT 168 ||||| | | ||||||| | |||| ||||| |||| ||||||||| | || Sbjct 1215 CCTCTTCCGGACTCAAGGACCCCAGTATCAAAGGCAGTTCCGAGGTTGAGCCTCGGGATT 1156 Query 169 TCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGC 228 |||| ||||||| |||||||||| | |||||||| |||| | | |||| | ||||| Sbjct 1155 TCACCCCTGACTTAAGATCCCGCCTACGCACCCTTTACGCCCAGTGATTCCGAACAACGC 1096 Query 229 TTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 | ||| ||| |||||||||||||||||||||||| ||||||||| ||||| ||| Sbjct 1095 TAGCCCCCTTCGTATTACCGCGGCTGCTGGCACGAAGTTAGCCGGGGCTTCTTC 1042 >seq88163 Length=652 Score = 129 bits (142), Expect = 1e-27 Identities = 133/174 (76%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 109 CCTCTCCAGCACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTT 168 ||||| | | |||||||| ||||| ||||| |||| ||||||||| | || Sbjct 5 CCTCTTCCGGACTCAAGATCCACAGTATCAAAGGCAGTTCCGAGGTTGAGCCTCGGGATT 64 Query 169 TCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGC 228 |||| ||||||| ||||||| | | |||||||| |||| | | |||| | ||||| Sbjct 65 TCACCCCTGACTTATGAACCCGCCTGCGCACCCTTTACGCCCAGTGATTCCGAACAACGC 124 Query 229 TTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 | ||| ||| |||||||||||||||||||||||| ||||||||| ||||| ||| Sbjct 125 TAGCCCCCTTCGTATTACCGCGGCTGCTGGCACGAAGTTAGCCGGGGCTTCTTC 178 >seq18499 Length=10962 Score = 125 bits (138), Expect = 1e-26 Identities = 171/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 |||||||| ||| || |||||| | | | |||| |||||||| |||||||||| Sbjct 5450 GCTTTCGCCCCTGAGTGTCAGTATCGGCCTAGCAGGGTGCCTTCGCTTTAGGTGTTCCTC 5391 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | ||||||| |||||||||| ||||| |||||||| |||| || | | ||||||| Sbjct 5390 CCGATATCTATACATTTCACCGTTACACCGGGAATTCCCCCTGCCCCTACCGTACTCAAG 5331 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 ||||||||| || ||||| ||||| ||| ||| | |||||| | Sbjct 5330 TTCAACAGTTTCCGCCGCCCTGACAGGGTTAAGCCCTGCCCTTTAACAGCAGACTTGTCA 5271 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATT 244 || ||||| ||||||||| |||||||| |||| ||| ||||||| || |||||| Sbjct 5270 AACCACCTACGGGCCCTTTACGCCCAATAATTCCGAATAGCGCTTGCATCCCCCGTATT 5212 >seq26518 Length=4982 Score = 105 bits (116), Expect = 1e-20 Identities = 79/93 (85%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| ||||||||||| | | | |||| | ||||||||||||| ||||| Sbjct 4886 CCCACGCTTTCGCTCCTCAGCGTCAATATCGGCCCAGAGACCCGCCTTCGCCACCGGTGT 4945 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACAC 93 || ||| |||||| |||||||||||||||||| Sbjct 4946 TCTTCCTGATATCTGCGCATTTCACCGCTACAC 4978 >seq98213 Length=732 Score = 100 bits (110), Expect = 5e-19 Identities = 84/103 (82%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| || | ||||||||| | |||| |||||||||| ||||| Sbjct 599 CCCACGCTTTCGTGCATGAGCGTCAGTACAGGCCCAGGGGATTGCCTTCGCCATCGGTGT 658 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCC 103 ||||||| ||||||||||||||||| ||||||| ||||||||| Sbjct 659 TCCTCCGCATATCTACGCATTTCACTGCTACACGCGGAATTCC 701 >seq31939 Length=3159 Score = 91.5 bits (100), Expect = 2e-16 Identities = 78/95 (82%), Gaps = 1/95 (1%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 ||| |||| || |||||| |||||| | | || |||||||||||| || ||||||||| Sbjct 1412 CCGTCTACGTGCTCTTTACGCCCAATCATTTCGAATAACGCTTGCCCCCCCCGTATTACC 1471 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 ||||||||||||||| |||| |||| || ||||| Sbjct 1472 GCGGCTGCTGGCACGGAGTTGGCCG-GGACTATTC 1505 >seq11188 Length=18125 Score = 87.8 bits (96), Expect = 3e-15 Identities = 170/249 (68%), Gaps = 3/249 (1%) Strand=Plus/Minus Query 44 GCCTTCGCCACTGGTGTTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAA--TT 101 || ||| || |||||||| | || |||||||||||||||||| ||| || || || Sbjct 7546 GCTTTCACCGTTGGTGTTCTTTTCGATCTCTACGCATTTCACCGCTCCAC-CGAAAAATT 7488 Query 102 CCGATTGCCTCTCCAGCACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCC 161 || |||| | | |||| || |||||| | || | | ||||||||||| Sbjct 7487 CCTTCTGCCCATACCATACTCCAGCTTGGTAGTTTCCATCGCCTGTTCAGGGTTGAGCCC 7428 Query 162 ATAGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGG 221 | ||| ||| | | ||| || |||||| | |||||| |||||| | | || Sbjct 7427 TGGGATTTGACAGCGGGCTTAAAAAGCCACCTACAGACGCTTTACGCCCAATCATTTTGG 7368 Query 222 ATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATT 281 |||| |||||| ||| |||||| ||| ||| ||||| |||||||| ||||||| Sbjct 7367 ATAATGCTTGCATCCTTTGTATTATCGCAGCTATTGGCATAGAGTTAGCCAATGCTTATT 7308 Query 282 CCTCAGGTA 290 || ||| || Sbjct 7307 CCCCAGATA 7299 >seq55717 Length=1126 Score = 86.0 bits (94), Expect = 1e-14 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 ||| |||| || |||||| |||||| | | || |||||||| ||| || ||||||||| Sbjct 27 CCGTCTACGTGCTCTTTACGCCCAATCATTTCGAATAACGCTCGCCCCCCCCGTATTACC 86 Query 248 GCGGCTGCTGGCACGTAGTTAGCCG 272 ||||||||||||||| |||| |||| Sbjct 87 GCGGCTGCTGGCACGGAGTTGGCCG 111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 827727413919