Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_025736.1
Length=2224
Score E
Sequences producing significant alignments: (Bits) Value
seq37548 91.5 2e-15
>seq37548
Length=2359
Score = 91.5 bits (100), Expect = 2e-15
Identities = 195/287 (68%), Gaps = 12/287 (4%)
Strand=Plus/Minus
Query 1893 AGCCCTCCAGCGACCACGTCTCCATCTTTGATCGCATAGTCATAACCGCCTT--CCGGCC 1950
||||| || ||||| ||||| ||||||||||| |||||||| || | ||| ||||
Sbjct 1866 AGCCCCCCCGCGACAACGTCACCATCTTTGATTGCATAGTCGTA--CATCTTGCCCGGTG 1809
Query 1951 TTCCTCGAGATGCTTCAATGTTAGGGTGGAAGCCTCCAACATCAAA-CACATCGGGTCTT 2009
| | | | | | ||||| ||||| ||| | |||||||| | | ||||||
Sbjct 1808 TGCGGCCGCAAGGCTGTATGTTCGGGTGATGGCCGTCCACATCAAATCGTCTGGGGTCTG 1749
Query 2010 CGGGATCGAAACTTTCGGGAG---AAATCGCAGAAAGCATGGAGATGAGTACCCCCATCA 2066
|| | ||| ||| | || || ||| || ||||||||| || ||||||
Sbjct 1748 AGGTGTAGAA----TCGACAACCAAAGTCAACGAACGCGTGGAGATGAACTCCTCCATCA 1693
Query 2067 GCGTGATGCTCTCGTCCAATGATACACTCACCGCCAAGGAATGCCAGATGGTCATTAACG 2126
|| |||| |||||||||||||||||||||| | || | || | ||| | |||
Sbjct 1692 GCATGATTCTCTCGTCCAATGATACACTCAGCTGGAACCTCCGACAAAAAGTCGCTGACG 1633
Query 2127 GCCCATGCATCAAGGTCGCCGCACTGTGCGTAGGTAAGGAGGACATA 2173
|||||| |||||| ||| ||||| | |||||| | ||| ||||
Sbjct 1632 ACCCATGGGTCAAGGCTGCCACACTGAGAGTAGGTGATGAGTGCATA 1586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6998052963060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |