Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_025736.1 Length=2224 Score E Sequences producing significant alignments: (Bits) Value seq37548 91.5 2e-15 >seq37548 Length=2359 Score = 91.5 bits (100), Expect = 2e-15 Identities = 195/287 (68%), Gaps = 12/287 (4%) Strand=Plus/Minus Query 1893 AGCCCTCCAGCGACCACGTCTCCATCTTTGATCGCATAGTCATAACCGCCTT--CCGGCC 1950 ||||| || ||||| ||||| ||||||||||| |||||||| || | ||| |||| Sbjct 1866 AGCCCCCCCGCGACAACGTCACCATCTTTGATTGCATAGTCGTA--CATCTTGCCCGGTG 1809 Query 1951 TTCCTCGAGATGCTTCAATGTTAGGGTGGAAGCCTCCAACATCAAA-CACATCGGGTCTT 2009 | | | | | | ||||| ||||| ||| | |||||||| | | |||||| Sbjct 1808 TGCGGCCGCAAGGCTGTATGTTCGGGTGATGGCCGTCCACATCAAATCGTCTGGGGTCTG 1749 Query 2010 CGGGATCGAAACTTTCGGGAG---AAATCGCAGAAAGCATGGAGATGAGTACCCCCATCA 2066 || | ||| ||| | || || ||| || ||||||||| || |||||| Sbjct 1748 AGGTGTAGAA----TCGACAACCAAAGTCAACGAACGCGTGGAGATGAACTCCTCCATCA 1693 Query 2067 GCGTGATGCTCTCGTCCAATGATACACTCACCGCCAAGGAATGCCAGATGGTCATTAACG 2126 || |||| |||||||||||||||||||||| | || | || | ||| | ||| Sbjct 1692 GCATGATTCTCTCGTCCAATGATACACTCAGCTGGAACCTCCGACAAAAAGTCGCTGACG 1633 Query 2127 GCCCATGCATCAAGGTCGCCGCACTGTGCGTAGGTAAGGAGGACATA 2173 |||||| |||||| ||| ||||| | |||||| | ||| |||| Sbjct 1632 ACCCATGGGTCAAGGCTGCCACACTGAGAGTAGGTGATGAGTGCATA 1586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6998052963060