Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_025737.1 Length=2199 Score E Sequences producing significant alignments: (Bits) Value seq37548 104 3e-19 >seq37548 Length=2359 Score = 104 bits (114), Expect = 3e-19 Identities = 190/272 (70%), Gaps = 6/272 (2%) Strand=Plus/Minus Query 1856 CCCTCCAGCGACCACGTCTCCATCTTTGATCGCATAGTCGTAACCGCCTTCCGGCTTTCC 1915 ||| || ||||| ||||| ||||||||||| ||||||||||| | | | || | | | | Sbjct 1864 CCCCCCCGCGACAACGTCACCATCTTTGATTGCATAGTCGTA-CATCTTGCCCGGTGTGC 1806 Query 1916 GTAAG-ATGGAACAAGGTTCGGGTGGCGGCCTCCAACATCAAAGACATC--GGATCGTCG 1972 | | | || | ||||||||| |||| | |||||||| | || || || | Sbjct 1805 GGCCGCAAGGCTGTATGTTCGGGTGATGGCCGTCCACATCAAAT-CGTCTGGGGTCTGAG 1747 Query 1973 GGATCGAAATCGGCGGGAGAAATCACAGAAAGCATGGAGATGAGTACCTCCATCAGCGTG 2032 | | ||| ||| | || ||| ||| || ||||||||| ||||||||||| || Sbjct 1746 GTGTAGAA-TCGACAACCAAAGTCAACGAACGCGTGGAGATGAACTCCTCCATCAGCATG 1688 Query 2033 CAACTCTCGTCCAATGATACACTCAGCTCCAAGGAACGCCAAATGGTCATTAACGGTCCA 2092 ||||||||||||||||||||||||| || || |||| ||| | ||| ||| Sbjct 1687 ATTCTCTCGTCCAATGATACACTCAGCTGGAACCTCCGACAAAAAGTCGCTGACGACCCA 1628 Query 2093 TGCATCAAGAGTGCCGCACTGTGCGTACGTGA 2124 || ||||| |||| ||||| | ||| |||| Sbjct 1627 TGGGTCAAGGCTGCCACACTGAGAGTAGGTGA 1596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6918166513710