Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_026163.1 Length=2277 Score E Sequences producing significant alignments: (Bits) Value seq37548 91.5 2e-15 >seq37548 Length=2359 Score = 91.5 bits (100), Expect = 2e-15 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 1897 GACAACGTCGCCATCCTTGATCGCGTAGTCGTAACCCTTCTCTGGTGTTCCCGACGAAGG 1956 ||||||||| ||||| ||||| || |||||||| ||| | ||||| | | || | | Sbjct 1855 GACAACGTCACCATCTTTGATTGCATAGTCGTACATCTTGCCCGGTGTGCG-GCCGCAAG 1797 Query 1957 ACTA-ATGTTTGGGTGGCAGCCGTCCACATCGAAGA-TATTAGCTCTTCGAAACCGTCTC 2014 || ||||| ||||| |||||||||||| || | | | ||| | | || Sbjct 1796 GCTGTATGTTCGGGTGATGGCCGTCCACATCAAATCGTCTGGGGTCTGAGGTGTAGAATC 1737 Query 2015 TTGATTCCAAAGTCAACGAACACGTGCAGATGAACTCCTCCATCCGCGTGATCTTCTCTT 2074 | ||||||||||||||| |||| ||||||||||||||||| || |||| |||| | Sbjct 1736 GACAA-CCAAAGTCAACGAACGCGTGGAGATGAACTCCTCCATCAGCATGATTCTCTCGT 1678 Query 2075 CCAATGACGCACT 2087 ||||||| |||| Sbjct 1677 CCAATGATACACT 1665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7167412235682