Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_027821.1
Length=2188
Score E
Sequences producing significant alignments: (Bits) Value
seq37548 93.3 6e-16
>seq37548
Length=2359
Score = 93.3 bits (102), Expect = 6e-16
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 1758 GGCCGTTCGAGTCCTCCTGCGACCACATCGCCATCCTTGATCCCGTAGTCGTAGCCCTTC 1817
|| ||| |||| || || ||||| || || ||||| ||||| | |||||||| |||
Sbjct 1875 GGTCGTCCGAGCCCCCCCGCGACAACGTCACCATCTTTGATTGCATAGTCGTACATCTTG 1816
Query 1818 TCTGGAGTCCCTCCAGACTTCTGTATGTTAGGGTGGCGGCCTCCCACATCGAAAACATCA 1877
| || || | || | ||||||||| ||||| |||| ||||||| ||| | ||
Sbjct 1815 CCCGGTGTGCGGCCGCAAGGCTGTATGTTCGGGTGATGGCCGTCCACATC-AAATCGTCT 1757
Query 1878 GCCTTTCGAC-TGCCGAACTGTCTGCCGAAATCGACGAGAGCGTGGAAGTGAATTCCCCC 1936
| | || || ||| | | || || || |||| ||||||| |||| ||| ||
Sbjct 1756 GGGGTCTGAGGTGTAGAATCGACAACCAAAGTCAACGAACGCGTGGAGATGAACTCCTCC 1697
Query 1937 ATCAGCGTGAGACTCTCTTCCAACGGTACACTCAGCTCGA 1976
|||||| ||| ||||| ||||| | ||||||||||| ||
Sbjct 1696 ATCAGCATGATTCTCTCGTCCAATGATACACTCAGCTGGA 1657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6883016475996
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |