Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06]
133,589 sequences; 833,240,550 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq59967 95.1 5e-14
>seq59967
Length=1670
Score = 95.1 bits (104), Expect = 5e-14
Identities = 193/285 (68%), Gaps = 4/285 (1%)
Strand=Plus/Plus
Query 88977 AAGTTCACCGCCGTGGGCCGAGAGTGCAGGGACAAGGCCGTGGTCGTGGTGGACGACTCT 89036
||| | | |||| ||||| |||| || || |||| | | || | || ||||||||
Sbjct 1220 AAGCTGAACGCCCTGGGCACGGAGTTCAAGGGCAAGAACATCCTCATCGTCGACGACTCG 1279
Query 89037 GTCGTGCGCGGCACCACATCCAAGTTCATAATCGACCTCCTTCGCAAGTCTGGCGCCACC 89096
||||||||||||| || |||| || ||||| | ||| | | || || | |
Sbjct 1280 ATCGTGCGCGGCACGACGAGCAAGGAGATCGTCGACATGGCCCGCGCGGCCGGAGCGAAC 1339
Query 89097 AAGGTCTACCTCGCTTCTTGCTCTCCCCCGATCCGTTACCCCAACGTGTACGGCATCGAC 89156
||||| |||| || | |||| ||| |||| ||||| |||||||||| ||| ||
Sbjct 1340 AAGGTGACGTTCGCCTCCGCCGCTCCGCCGGTCCGCTACCCGCACGTGTACGGTATCAAC 1399
Query 89157 ATACC--GTCGGCCAAGGAGCTCATTGCTTCTGGTCGCACCGAGCACGAGGTGGCTCTCC 89214
|| || | |||| ||||||||| || || || || | | |||| | || | |
Sbjct 1400 ATGCCGAGCCGGC--GGGAGCTCATCGCGTCGGGCCGGAAGATCCCCGAGATCGCCCGCG 1457
Query 89215 TCCTCGGAGCCGACCAGGTCATCTATCAGAGTGTCGACGACTTGC 89259
||||| |||||||| | ||||| ||| ||||||||| |||
Sbjct 1458 AGCTCGGGGCCGACCACCTGATCTACCAGGAGGTCGACGACATGC 1502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2081083910797022
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |