Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_030143.1 Length=2240 Score E Sequences producing significant alignments: (Bits) Value seq37548 100 4e-18 >seq37548 Length=2359 Score = 100 bits (110), Expect = 4e-18 Identities = 128/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 2043 CCAAAATCGACGAAAACATGGAGATGAGTACCTCCATCAGCGTGATCCTCTCGTCCAATG 2102 ||||| || ||||| | ||||||||| ||||||||||| |||| ||||||||||||| Sbjct 1731 CCAAAGTCAACGAACGCGTGGAGATGAACTCCTCCATCAGCATGATTCTCTCGTCCAATG 1672 Query 2103 ATACACTCCGCTCCAAGAGACGAAATATGGTCGAGAACGTCCCACTCATCGAGCGTGCCG 2162 |||||||| ||| || ||| | | |||| ||| |||| || || |||| Sbjct 1671 ATACACTCAGCTGGAACCTCCGACAAAAAGTCGCTGACGACCCATGGGTCAAGGCTGCCA 1612 Query 2163 CATTGAGAGTAGGTGAGGAGGACATAACGAGCAGAAAAATA-AAAAGTTGGCAT 2215 || ||||||||||||| ||| |||| ||| || || | |||||| ||||| Sbjct 1611 CACTGAGAGTAGGTGATGAGTGCATACTGAG-AGCGGAAGACAAAAGTGGGCAT 1559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7049180290644