Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_031108.1 Length=39640 Score E Sequences producing significant alignments: (Bits) Value seq115307 134 3e-27 >seq115307 Length=544 Score = 134 bits (148), Expect = 3e-27 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 36428 GAAACCCCTATCACCATCGTGGGCAACCTCACCGCCGACCCCGAACTGCGATATACCAAT 36487 |||||| ||||| | | || |||||||| ||||||||||||||| | ||| Sbjct 199 GAAACCGTCATCACGCTGATCGGGAACCTCACGAACGACCCCGAACTGCGCTTCACCCCG 140 Query 36488 TCGGGCATTGCCGTCGCCAACTTCACCGTCGCATCCACACCACGCACATTCGACCGGCAA 36547 ||||| || || ||||||||||| ||||| || || || ||||| |||||||| || Sbjct 139 TCGGGTGCCGCGGTGGCCAACTTCACGGTCGCCTCGACTCCCCGCACGTTCGACCGTCAG 80 Query 36548 GCCAACGAATGGAAGGACGGCGAGGCCCTGTTCCTGCCCTGCTCGGTGTGGCGTCAGCCG 36607 | ||||| ||||||||||||||| | |||||| ||| ||| || | ||||| | || Sbjct 79 TCGAACGAGTGGAAGGACGGCGAGACGCTGTTCATGCGTTGCGCGATCTGGCGCGAAGCG 20 Query 36608 GCCGAGAACGTGGCCGA 36624 || |||||||| ||||| Sbjct 19 GCGGAGAACGTCGCCGA 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126525365120036