Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Castanea_20mollissima_20[genbank_20GCA_5F000763605.1_202014-10-06] 133,589 sequences; 833,240,550 total letters Query= NC_033743.1 Length=2182 Score E Sequences producing significant alignments: (Bits) Value seq37548 95.1 2e-16 >seq37548 Length=2359 Score = 95.1 bits (104), Expect = 2e-16 Identities = 208/305 (68%), Gaps = 10/305 (3%) Strand=Plus/Minus Query 1850 CCCGCCTGCAACAACATCTCCATCCTTGATTGCATAGTCATA-ACCGCGCTCCGGA---C 1905 ||| || || ||||| || ||||| |||||||||||||| || | | || |||| | Sbjct 1864 CCCCCCCGCGACAACGTCACCATCTTTGATTGCATAGTCGTACATCTTGC-CCGGTGTGC 1806 Query 1906 GACCTCTAGATGGCGCAATGTTTGGGTGGTGGCCTCCGACATCAAAGAAA-TCGGGTCGT 1964 | || | || || ||||| ||||| ||||| | |||||||| | ||||| Sbjct 1805 GGCCGCAAG---GCTGTATGTTCGGGTGATGGCCGTCCACATCAAATCGTCTGGGGTCTG 1749 Query 1965 CGGGATTGCTTCTTTCTTCCGAAATCCACAAAAGCATGGAGGTGAGTACCTCCATCAGAG 2024 || | | || | || || || || || || ||||| ||| |||||||||| Sbjct 1748 AGGTGTAGAATCGA-CAACCAAAGTCAACGAACGCGTGGAGATGAACTCCTCCATCAGCA 1690 Query 2025 TGATTTTCTCGTCCGACGATACACTCAGCTCCAAGCGCTGACAAATGGTCTGAAACGGCC 2084 ||||| |||||||| | ||||||||||||| || | | |||||| ||| ||| || Sbjct 1689 TGATTCTCTCGTCCAATGATACACTCAGCTGGAACCTCCGACAAAAAGTCGCTGACGACC 1630 Query 2085 CAACCATCAAGCGTTCCGCACTGAGCGTAAGTGAGGAGGACATAACGAGCTGAGAAGAGG 2144 || ||||| | || ||||||| ||| |||| ||| |||| ||| ||||| Sbjct 1629 CATGGGTCAAGGCTGCCACACTGAGAGTAGGTGATGAGTGCATACTGAGAGCGGAAGACA 1570 Query 2145 AAAGT 2149 ||||| Sbjct 1569 AAAGT 1565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6863843728152