Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catharanthus_20roseus_20[genbank_20GCA_5F000949345.1_202015-03-06] 79,302 sequences; 522,653,749 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq65559 84.2 3e-14 seq73434 80.6 3e-13 seq70880 80.6 3e-13 seq36631 80.6 3e-13 seq61460 78.8 1e-12 seq39516 77.0 4e-12 seq71940 75.2 1e-11 seq71875 75.2 1e-11 seq69797 75.2 1e-11 seq63777 75.2 1e-11 seq58965 75.2 1e-11 seq57550 75.2 1e-11 seq46103 75.2 1e-11 >seq65559 Length=45067 Score = 84.2 bits (92), Expect = 3e-14 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GC 68 || |||||| |||||| ||| | |||||| |||||| |||||||||| ||| | | || Sbjct 11918 AAGCCAACAGAATAGGAACGAAA-TCCTATATTATTATCCCATGCTAATATATCCAGAGC 11976 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 || || |||||||||||||||||||| |||| |||| Sbjct 11977 ATAGGCTTGCTTTGAACACTCTAATTTCTTCAAAGTAA 12014 >seq73434 Length=31361 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGCGTA 71 |||||| |||||| || | ||||||| | |||| |||||||||||||| | | || || Sbjct 1598 CCAACATAATAGGACCGAA-GTCCTATATTGTTATCCCATGCTAATGTATCCAGAGCTTA 1656 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || ||||||||| |||||||||| |||| |||| || Sbjct 1657 GGCTTGCTTTGAATACTCTAATTTCTTCAAAGTAACAG 1694 >seq70880 Length=17649 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT-TCGGGCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | | ||| Sbjct 10115 CCAACAGAATAGGATCGAAA-TCCTATATTGTTATACCATGCTAATGTATCTAGAGTGTA 10173 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 ||| ||||||||||||| |||||| |||| |||| || Sbjct 10174 AGCTTGCTTTGAACACTATAATTTCTTCAAAGTAACAG 10211 >seq36631 Length=37147 Score = 80.6 bits (88), Expect = 3e-13 Identities = 77/95 (81%), Gaps = 3/95 (3%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| |||||| |||||||||||||| | | ||| Sbjct 26606 CCAACAGAATAGGACCGAAA-TCCTATATTATTAT-CCATGCTAATGTATCCAAAGAGTA 26663 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 || ||||||||||||||||||||| |||| |||| Sbjct 26664 GGCTTGCTTTGAACACTCTAATTTTTTCAAAGTAA 26698 >seq61460 Length=9996 Score = 78.8 bits (86), Expect = 1e-12 Identities = 76/95 (80%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 7812 CCAACAGAATAGG-ACCAAAATCCTATATTGTTATCCCATGCTAATGTATCCAGAGCGTA 7870 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 | |||||||||||||||||||| |||| |||| Sbjct 7871 GACTTGCTTTGAACACTCTAATTTCTTCAAAGTAA 7905 >seq39516 Length=4291 Score = 77.0 bits (84), Expect = 4e-12 Identities = 76/96 (79%), Gaps = 2/96 (2%) Strand=Plus/Plus Query 16 ACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTAAGC 74 ||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| || Sbjct 1885 ACAGAATAGG-ACCAAAATCCTATATTGTTATCCCATGCTAATGTATCCAGAGCGTAGGC 1943 Query 75 CTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 |||||||||||||||||||| | || |||| ||| Sbjct 1944 TTGCTTTGAACACTCTAATTTCTTTAAAGTAACAGT 1979 >seq71940 Length=44746 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGG-CGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||||| | |||| Sbjct 21943 CCAACATAATAGGATCGAAA-TCCTATATTGTTATCCCATGCTAATGTATTCAGAACGTA 21885 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||| ||||||||||||| | || |||| || Sbjct 21884 GGCTTGCTTTAAACACTCTAATTTCTTTAAAGTAATAG 21847 >seq71875 Length=32484 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GC 68 || |||||| |||||| || | |||||| | |||||| ||||||||| || | | || Sbjct 17382 AAGCCAACAGAATAGG-ACAAAAATCCTATATTGTTATTCGATGCTAATGCATCCAGAGC 17324 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 ||||| |||||||||||||||||||| ||| |||| Sbjct 17323 CTAAGCTTGCTTTGAACACTCTAATTTCTTCATAGTAA 17286 >seq69797 Length=44808 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT-TCGGGCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||| | | | ||||| Sbjct 24813 CCAACAGAATAGG-ACTAAAATCCTATATTGTTATCCCATGCTAATGTGTCTAGAGCGTA 24871 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||| ||||||||||||| |||| |||| || Sbjct 24872 GGCTTGCTTTCAACACTCTAATTTCTTCAAAGTAACAG 24909 >seq63777 Length=10903 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT-TCGGGCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||| | | ||||| Sbjct 6823 CCAACAGAATAGGACCGAAA-TCCTATATTGTTATCTAATGCTAATGTATCTAGAGCGTA 6765 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||||||||||||||| |||| |||| || Sbjct 6764 GGCTTGCTTTGAACACTCTAATTTCTTCAAAGTAATAG 6727 >seq58965 Length=3857 Score = 75.2 bits (82), Expect = 1e-11 Identities = 80/103 (78%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTAT-TCGGGCGTA 71 |||||| |||||| | | | |||||| | |||| |||||||||||||| | | ||||| Sbjct 2102 CCAACAGAATAGGAATGAAA-TCCTATATTGTTATCCCATGCTAATGTATCTAGAGCGTA 2044 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTG 114 | | |||||||||||||||||| |||| |||| | | ||| Sbjct 2043 GACTTACTTTGAACACTCTAATTTCTTCAAAGTAACATTGCTG 2001 >seq57550 Length=83566 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||| | |||||| || | |||||| | |||| |||||||||||||| | | || || Sbjct 67530 CCAAGAGAATAGGATCGAAA-TCCTATATTGTTATCCCATGCTAATGTATCCAGAGCATA 67472 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||||||||||||||| |||| |||| || Sbjct 67471 GGCTTGCTTTGAACACTCTAATTTCTTCAAAGTAATAG 67434 >seq46103 Length=16447 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||||||||||| || | |||||| | |||| |||||||||| ||| | | || || Sbjct 9272 CCAACAAAATAGGACCGAAA-TCCTATATTGTTATCCCATGCTAATATATCCAGAGCATA 9214 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || ||||||||||| |||||||| |||| |||| || Sbjct 9213 GGCTTGCTTTGAACATTCTAATTTCTTCAAAGTAACAG 9176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594742744668