Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Catharanthus_20roseus_20[genbank_20GCA_5F000949345.1_202015-03-06] 79,302 sequences; 522,653,749 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq64349 71.6 1e-10 >seq64349 Length=7991 Score = 71.6 bits (78), Expect = 1e-10 Identities = 89/121 (74%), Gaps = 6/121 (5%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCG---GATCACTATGAC 57 || ||||||||||||||| || |||||||||| || | ||||| |||||||| | | Sbjct 3424 TAACTTTTATCCGTTGAGTGACGGCCCTTCCACTC---GGCACCGTCAGATCACTAAGGC 3368 Query 58 CTGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCAC 117 | |||||| ||||| | || | ||| ||| |||||| | ||| |||| ||| || Sbjct 3367 CAACTTTCGTCCCTGCTAAACGAGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGTAC 3308 Query 118 T 118 | Sbjct 3307 T 3307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351738303400