Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq6087 246 1e-62 seq89 228 3e-57 seq293 197 6e-48 seq926 183 1e-43 seq1835 147 9e-33 seq431 131 7e-28 seq252 120 1e-24 >seq6087 Length=58568 Score = 246 bits (272), Expect = 1e-62 Identities = 225/281 (80%), Gaps = 5/281 (2%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT-CA 463 |||||||||||| ||||||||||||||||||| |||| | ||||||| ||| || Sbjct 12574 CGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCCAGCA 12515 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522 ||||||| | ||||| ||| ||| || || || ||| | ||||||||| |||| Sbjct 12514 AACCCGTAAGGCGTAAGGAAGCTGATTGGCGG---GATCCCTAGCGGGTGCACCGCCGAC 12458 Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582 ||| | |||| | | || || || |||| ||||||| |||| ||||||||||||||| Sbjct 12457 CGACCTTGATCTTCTGAGAAGGGTTCGAGTGAGAGCATGCCTGTCGGGACCCGAAAGATG 12398 Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642 ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | Sbjct 12397 GTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA 12338 Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 12337 CTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 12297 Score = 224 bits (248), Expect = 4e-56 Identities = 219/279 (78%), Gaps = 5/279 (2%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT-CA 463 |||||||||||| ||||||||||||||| ||| |||| | || |||| ||| || Sbjct 30011 CGGCCCGTCTTGAAACACGGACCAAGGATTCTGACATGTGTGTGAGTCAACGGGCCAGCA 29952 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522 ||||||| | ||||| ||| ||| || || || ||| | ||||||||| |||| Sbjct 29951 AACCCGTAAGGCGTAAGGAAGCTGATTGGCGG---GATCCCTAGCGGGTGCACCGCCGAC 29895 Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582 ||| | |||| | | || || || ||| ||||||| |||| ||||||||||||||| Sbjct 29894 CGACCTTGATCTTCTGAGAAGGGTTCTAGTGAGAGCATGCCTGTCGGGACCCGAAAGATG 29835 Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642 ||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||||| | Sbjct 29834 GTGAACTATGCCTGAGCGGGGCGAAGCTAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA 29775 Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 ||| ||||||||||| ||||| | |||||||||||||| Sbjct 29774 CTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGC 29736 Score = 154 bits (170), Expect = 6e-35 Identities = 133/165 (81%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 ||| ||||||| |||||||||||||||||| | || ||| |||||||| | || || || Sbjct 12960 TCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAATTCCGTCCAAGGC 12901 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||| ||| ||||||||||||| ||||||| | || ||||||||||||| |||| Sbjct 12900 TAAATACGGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 12841 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||||||||| ||| || | |||||||| | ||||||||| Sbjct 12840 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGCCGGGAGGGAAGCG 12796 Score = 134 bits (148), Expect = 6e-29 Identities = 113/139 (81%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 ||| ||||||| ||| |||||||||||||| | || ||| |||||||| | || || || Sbjct 30314 TCGGCGAGTCGGGTTATTTGGGAATGCAGCCCAAATCGGGCGGTAAATTCCGTCCAAGGC 30255 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||| ||| ||||||||||||| ||||||| | || ||||||||||||| |||| Sbjct 30254 TAAATACGGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 30195 Query 155 TGGAAAGAGAGTTAAAAAG 173 || ||||||||| ||| || Sbjct 30194 TGAAAAGAGAGTCAAAGAG 30176 >seq89 Length=623066 Score = 228 bits (252), Expect = 3e-57 Identities = 221/281 (79%), Gaps = 5/281 (2%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT-CA 463 |||||||||||| ||||||||||||||||||| |||| | ||||||| ||| || Sbjct 305685 CGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCCAGCA 305744 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522 ||||| | | ||||| ||| ||| || | || ||| | ||||||||| |||| Sbjct 305745 AACCCATAAGGCGTAAGGAAGCTGATTGGCAG---GATCCCTAGCGGGTGCACCGCCGAC 305801 Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582 ||| | |||| | | || || || |||| ||||||| |||| ||||||||||||||| Sbjct 305802 CGACCTTGATCTTCTGAGAAGGGTTCGAGTGAGAGCATGCCTGTCGGGACCCGAAAGATG 305861 Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642 ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | Sbjct 305862 GTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA 305921 Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| |||||||||| | ||| | |||||||||||||||| Sbjct 305922 CTGACGTGCAAATCATTAGTCTGACTTGGGTATAGGGGCGA 305962 Score = 140 bits (154), Expect = 1e-30 Identities = 130/165 (79%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 ||| | ||||| |||||||||||||||||| | || ||| |||||||| | || || || Sbjct 305299 TCGGCAAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAATTCCATCCAAGGC 305358 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 |||||| ||| ||||||||| ||| ||||||| | || ||||||||||||| ||| Sbjct 305359 TAAATACGGGCGAGAGACCGAAAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGTCTT 305418 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||||||||| ||| || | |||||||| | ||||||||| Sbjct 305419 TGAAAAGAGAGTCAAAGAGTGCTTGAAATTGCCGGGAGGGAAGCG 305463 >seq293 Length=549683 Score = 197 bits (218), Expect = 6e-48 Identities = 215/281 (77%), Gaps = 6/281 (2%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT-CA 463 |||||||||||| |||||| |||||| |||| |||| | ||||||| |||| || Sbjct 204232 CGGCCCGTCTTGAAACACGAACCAAGTTGTCTGACATGTGTGCGAGTCAATGGGCCAGCA 204291 Query 464 AACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522 ||| ||| | ||||| ||| ||| || || || ||| | ||||| ||| |||| Sbjct 204292 AACTCGTAAGGCGTAAGGAAGTTGATTGGCGG---GATCCCTAGCGGGTGTACCGCCGAC 204348 Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582 ||| | |||| | | || || || |||| ||||||| |||| ||||| ||||||||| Sbjct 204349 CGACCTTGATCTTCTGAGAAGGGTTCGAGTGAGAGCATGCCTGTCGGGACTCGAAAGATG 204408 Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642 ||||||||||||||| ||| |||||||||||||||||||||||||| | |||| | Sbjct 204409 GTGAACTATGCCTGAGCGGGGCAAAGCCAGAGGAAACTCTGGTGGAGGCCAGTAGCGATA 204468 Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||||||||| ||| | |||||||||||||||| Sbjct 204469 CTGACGTGCAAATCGTTCG-GTGACTTGGGTATAGGGGCGA 204508 Score = 86.0 bits (94), Expect = 3e-14 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 ||||||||||| |||||||||||||||||| | || ||| |||||||| || || | Sbjct 204641 TCGACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAATTCAGTCCAAGGA 204700 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAG 126 ||||||| ||| ||| |||||| || ||||| Sbjct 204701 TAAATATGGGCGAGATACCGATGGCAAACAAG 204732 >seq926 Length=1058432 Score = 183 bits (202), Expect = 1e-43 Identities = 211/281 (75%), Gaps = 5/281 (2%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT-CA 463 |||||| ||||| |||||| |||||||||||| |||| | ||||||| |||| || Sbjct 432153 CGGCCCATCTTGAAACACGAACCAAGGAGTCTGACATGTTTGCGAGTCAATGGGCCAGCA 432094 Query 464 AACCCGTGCGC-GTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGAC 522 ||||||| | |||| ||| | | || | | ||| | |||||||| | || Sbjct 432093 AACCCGTAAGGAGTAAGGAAGCTAATTGGCCGA---ATCCCTGGCGGGTGCACAGCCAAC 432037 Query 523 CGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582 || | |||| | | || || || |||| || |||| |||| |||||||||||||| Sbjct 432036 TGACCTTGATCTTCTGAGAAGGGTTCGAGTGAGCGCATTCCTGTCAGGACCCGAAAGATG 431977 Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642 ||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | Sbjct 431976 GTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA 431917 Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| |||||||||| || | | ||||||||||||| || Sbjct 431916 CTGACGTGCAAATCCTTCATTTGACTTGGGTATAGGGGTGA 431876 Score = 141 bits (156), Expect = 4e-31 Identities = 128/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 39 CGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAA 98 ||||||| |||||||||||||||||| | || ||| |||||||| | || || |||||| Sbjct 432536 CGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAATTCCGTCCAAGGCTAAA 432477 Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || ||| ||||||||||||| ||||||| | || ||||||||||||| |||||| | Sbjct 432476 TACGGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAA 432417 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| ||| || | ||||||| ||||||||| Sbjct 432416 AAGAGAGTCAAAGAGTGCTCGAAATTGACAGGAGGGAAGCG 432376 >seq1835 Length=198957 Score = 147 bits (162), Expect = 9e-33 Identities = 129/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 39 CGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAA 98 ||||||| |||||||||||||||||| | || ||| |||||||| | || || |||||| Sbjct 53928 CGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAATTCCGTCCAAGGCTAAA 53987 Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || ||| ||||||||||||| ||||||| | || ||||||||||||| |||||| | Sbjct 53988 TACGGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAA 54047 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| ||| || | ||||||| | ||||||||| Sbjct 54048 AAGAGAGTCAAAGAGTGCTTGAAATTACCGGGAGGGAAGCG 54088 >seq431 Length=417629 Score = 131 bits (144), Expect = 7e-28 Identities = 120/152 (79%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 48 TTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCA 107 ||||||||||||||||| | || ||| |||||||| | || || |||||||| ||| | Sbjct 62869 TTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAATTCCGTCCAAGGCTAAATACGGGCGA 62810 Query 108 GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTT 167 |||||||||||| ||||||| | || ||||||||||||| |||||| ||| ||||| Sbjct 62809 GAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAATAGAGTC 62750 Query 168 AAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||| || | ||||||| | ||||||||| Sbjct 62749 AAAGAGTGCTTGAAATTACCGGGAGGGAAGCG 62718 >seq252 Length=683166 Score = 120 bits (132), Expect = 1e-24 Identities = 114/146 (78%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||| | || || |||||||| |||| || ||||||| Sbjct 529474 GAGTCGGGTTGTTTGGGAATGCAAGCCAAATCAGGCGGTAAATTCCTTCCAAGGCTAAAT 529533 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||||| ||||||| | || ||||||||||||| | | || || Sbjct 529534 ACGGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGAGTATGAAA 529593 Query 160 AGAGAGTTAAAAAGCACGTGAAATTG 185 | ||||| ||| || | |||||||| Sbjct 529594 ATAGAGTCAAAGAGTGCTTGAAATTG 529619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079650214850