Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq1434 91.5 2e-16 seq1512 87.8 2e-15 seq1443 84.2 2e-14 >seq1434 Length=474730 Score = 91.5 bits (100), Expect = 2e-16 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | || || ||||||| |||||||||| ||| || | ||| Sbjct 361290 CAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCTTGAGAGAACCATGTCGAAG 361231 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 ||||| |||||| ||||||||||||||||||| || |||| Sbjct 361230 GAACTCGGCAAAATGACCCTGTAACTTCGGGAGAAGGGGT 361191 >seq1512 Length=221874 Score = 87.8 bits (96), Expect = 2e-15 Identities = 86/110 (78%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| ||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 15825 TAAGGAACTCGGCAAGATAGCCCCGTAACTTCGGGAGAAGGGGTACCTCCTCACAAA--G 15768 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 15767 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 15718 >seq1443 Length=413265 Score = 84.2 bits (92), Expect = 2e-14 Identities = 85/110 (77%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| ||||| | |||| ||||||| || | || |||| ||| | || ||| || Sbjct 397678 TAAGGAACTCAGCAAAATAACCCCGTAACTTTGGTAGAAGGGGTGCCTCCTCACAAAGGG 397619 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | | ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 397618 G--GTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 397571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531116084178