Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= AAMG01001756.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq3806 100 5e-19 seq65 87.8 3e-15 >seq3806 Length=238933 Score = 100 bits (110), Expect = 5e-19 Identities = 75/88 (85%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 185 GGATGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGGATTTGT 244 ||| |||||||| ||||| |||| | ||||||||| ||| |||| || ||||||||||| Sbjct 127321 GGAAGGGCAAAACAGTAAGTTGAAGAGGATTGATGTGCCTAATGAGTTCTCTGGATTTGT 127262 Query 245 GCAATCTGGATGCTGTGTGGAGATCTGA 272 ||| ||||| |||||||||||||| ||| Sbjct 127261 GCAGTCTGGTTGCTGTGTGGAGATTTGA 127234 >seq65 Length=1506704 Score = 87.8 bits (96), Expect = 3e-15 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 185 GGATGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGGATTTGT 244 ||| |||||| | | ||| |||| | ||| ||||| |||||||| || ||||||||||| Sbjct 1503250 GGAGGGGCAAGACAATAAGTTGAAGAGGATCGATGTGCCTGATGAGTTCTCTGGATTTGT 1503309 Query 245 GCAATCTGGATGCTGTGTGGAGATCTGA 272 | | ||||| |||||||||||||| ||| Sbjct 1503310 GTAGTCTGGTTGCTGTGTGGAGATTTGA 1503337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918250236512