Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq330 78.8 8e-13 seq2005 77.0 3e-12 >seq330 Length=490573 Score = 78.8 bits (86), Expect = 8e-13 Identities = 115/160 (72%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 3 GAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGA-TTAGCTCCCCCTCGCGG 61 |||||| || || ||||||| | | | || || | ||| ||||||| ||||| || Sbjct 375638 GAGTTGAAGCCTGCAATCCGAATTGAGG-ACGGGTTGTTGGAGTTAGCTCACCCTCACGA 375696 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | || |||| ||| | ||||||| ||||||| ||| |||||||| || Sbjct 375697 GATCGCAACCCTTTGTCCCAAACATTGTAACACGTGTGTCACCCAGGGCATAAGGGGCAC 375756 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || || |||||||||||| |||||||||| || || |||| Sbjct 375757 GATGATTTGACGTCATCCTCACCTTCCTCGGGCTTATCAC 375796 >seq2005 Length=366411 Score = 77.0 bits (84), Expect = 3e-12 Identities = 100/133 (75%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 30 ATACACTTTCTGGGATTAGCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGT 89 ||||| ||||||| ||| ||||| ||| | || ||| |||| | ||||||| Sbjct 268953 ATACA-TTTCTGG-ATTTGCTCCACCTTATAATCTAGCTTCCCATTGTAATTTCCATTGT 269010 Query 90 ATGACGTGTGAAGCCCTA-CCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCC 148 | |||| || | |||| ||||||||||||||| | |||||||||||||||||| |||| Sbjct 269011 AGCACGTATGT-GACCTAGCCCATAAGGGCCATGCGAACTTGACGTCATCCCCACATTCC 269069 Query 149 TCCGGTTTGTCAC 161 | | || | |||| Sbjct 269070 TACAGTATATCAC 269082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415934282790